Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 seq461 84.2 2e-11 seq5 84.2 2e-11 >seq2 Length=4202288 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||||||| | |||| |||| |||||||| ||||| Sbjct 1893249 GTGGATTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGCTGCTTACCA 1893308 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| || ||||| || | |||||| || || ||||| ||| Sbjct 1893309 GCAAAGATAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTAGACTTC 1893368 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | | || || || ||||| || | || || || | || Sbjct 1893369 ACATTGTCGATGGTATCAGATGACTCCACCTCCAGAGTAATGGTCTTTCCAGTTAAGGTC 1893428 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 1893429 TTGACGAAGATTTGCATA 1893446 >seq461 Length=561 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || || || || ||||||||| | | | | ||||||| Sbjct 338 ACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCT 279 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| |||||| | || | | |||||| || || || | || || || || | Sbjct 278 AGCTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGG 219 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || || || | || || | ||| Sbjct 218 ATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTTTTT 159 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||| |||||||||||||| ||||| Sbjct 158 CCGGTCAAGGTTTTCACAAAGATCTGCAT 130 >seq5 Length=2272025 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| |||| |||||||| ||||| || | Sbjct 1174688 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAG 1174747 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 || || ||||| || ||||| || | ||||| || || ||||||| || | | Sbjct 1174748 ATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 1174807 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | || ||||| || || || || Sbjct 1174808 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 1174867 Query 27237 AAGATTTGCAT 27247 ||||| ||||| Sbjct 1174868 AAGATCTGCAT 1174878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931841629328