Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 2e-12 seq4 84.2 7e-11 >seq12 Length=1358207 Score = 89.7 bits (98), Expect = 2e-12 Identities = 126/176 (72%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||||| | || || || || ||||||| || || || | || || || || | Sbjct 114141 CACCTTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGT-G 114199 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| || |||||||||||| | || ||||| || || |||| ||| ||||||| | Sbjct 114200 CTTTTGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAA 114259 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871 ||||||||||| || || ||||| |||| ||||||||| || || ||| || Sbjct 114260 ACGAACTGATCTCCCGTGATGAGGGCCTGCACACCGACTTCGCTTGCCTGCTCCAC 114315 >seq4 Length=2550084 Score = 84.2 bits (92), Expect = 7e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | ||||| ||||||||| ||||| ||||| || || || ||| ||| || Sbjct 816443 CCCATGCTTCGTGTCTTCAACAACACTGCTCGGTACGTGGACCAGGGTGGCAACAAGCGA 816502 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 || || || ||| |||||||||| ||||| ||||||||||| Sbjct 816503 CCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCACGCCGA 816543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588325946825830