Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq12 89.7 2e-12
seq4 84.2 7e-11
>seq12
Length=1358207
Score = 89.7 bits (98), Expect = 2e-12
Identities = 126/176 (72%), Gaps = 1/176 (1%)
Strand=Plus/Plus
Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755
|| ||||| | || || || || ||||||| || || || | || || || || |
Sbjct 114141 CACCTTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTGGT-G 114199
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
|||| || |||||||||||| | || ||||| || || |||| ||| ||||||| |
Sbjct 114200 CTTTTGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAA 114259
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTAC 443871
||||||||||| || || ||||| |||| ||||||||| || || ||| ||
Sbjct 114260 ACGAACTGATCTCCCGTGATGAGGGCCTGCACACCGACTTCGCTTGCCTGCTCCAC 114315
>seq4
Length=2550084
Score = 84.2 bits (92), Expect = 7e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||| ||||||||| ||||| ||||| || || || ||| ||| ||
Sbjct 816443 CCCATGCTTCGTGTCTTCAACAACACTGCTCGGTACGTGGACCAGGGTGGCAACAAGCGA 816502
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
|| || || ||| |||||||||| ||||| |||||||||||
Sbjct 816503 CCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCACGCCGA 816543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588325946825830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |