Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 242 4e-59 seq12 95.1 1e-14 seq10 95.1 1e-14 >seq4 Length=2550084 Score = 242 bits (268), Expect = 4e-59 Identities = 912/1407 (65%), Gaps = 59/1407 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || | | ||||| || || ||||| || |||| Sbjct 816122 CCACAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTC 816181 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || |||||| | || | || | ||||| | || |||||||| Sbjct 816182 CTCGAGACCTACAACCTCATGTCCATGAAGTTTTTT-ACCCACGCCTCCCCCACCCTCTT 816240 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| || ||||| | || |||||| | | | || |||||||| Sbjct 816241 CAACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGA 816300 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | |||||||| | || || | | |||||| ||||| ||| |||||| Sbjct 816301 CAGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGG 816360 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || || || | || |||| | | || | || ||| || || || Sbjct 816361 TGGCATCGGTCTCAACGTCCACCGAATCCGCGCAACCGGTTCATACATTGCCGGTACCAA 816420 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 |||| || ||||| | | || |||||||| || || ||| ||| || || || || Sbjct 816421 TGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTACGT 816480 Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637 | || | ||| ||| || || |||| |||| |||||||| |||||||| Sbjct 816481 GGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCACGC 816540 Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCG 104697 ||| || | |||||||| || | || ||||| || | || |||| || ||| Sbjct 816541 CGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGAGCCCG 816600 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 ||| | ||| ||| || ||||| || ||||| ||||||||| | || ||| ||| || Sbjct 816601 TGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAGAACGG 816660 Query 104758 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGA 104817 | ||| ||||| | || || | || ||||| || ||||| | || ||||| Sbjct 816661 TGACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGATTGCTACGGCGAGGA 816720 Query 104818 GTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCGACGGT 104871 |||||| ||| | || ||||| ||| | | | ||||| ||| || || Sbjct 816721 GTTTGAGGCCTTGTATGAGAAGTATGAGAAGGCCGGTAAGGGTCGCAAGACCATGAAGG- 816779 Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 |||| || | ||| | |||||||| | |||| || |||||||||| || | Sbjct 816780 CCCAGAAGC-----TCTGGTACGCTATTCTTGAAGCTCAGACTGAGACTGGTAACCCCTT 816834 Query 104932 CATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||||||||| || | || |||| ||||| || || ||||| | || || Sbjct 816835 CATGCTTTACAAGGA-TCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACTATTC 816893 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| || || || |||||| | |||| | | | ||||| || || | Sbjct 816894 GCAGCTCCAACCTGTGCACTGAAATCATCGAATACAGCGCCCCTGATGAAGTTGCCGTCT 816953 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110 | ||||| || || | || || || | || || | | | |||| || ||| || Sbjct 816954 GCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGTTGA-CTACA-ACAACGA---TTG-TT 817007 Query 105111 ATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164 ||| |||| | ||||| ||||| | |||||| | ||||| |||| | | Sbjct 817008 ATGACTTCCAAAAGTTGCACGAGGTTACCCAGACTGTCGTCCGCAACCTGAACAAGATCA 817067 Query 105165 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 ||||| || |||||| || |||| ||||| || || ||| | ||||||| Sbjct 817068 TTGATGTCAACCATTACCCTGTTCCTGAG---GCTCGCAACAGCAACATGCGCCACCGTC 817124 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACG-CA 105277 | || ||| ||||||| |||||||| || |||| | ||| ||| || || | | Sbjct 817125 CCATCGGTGTCGGTGTCCAGGGTCTTGCTGATG----CCTTCCTTGCCCTCCGCATGCCT 817180 Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337 ||||| ||| || || || | || | || |||||||| || |||||||| Sbjct 817181 TTTGAGTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTTGAGACTATCTATCACGCT 817240 Query 105338 GCTCTTGA-GGCG--AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 ||| |||| ||| || ||| ||| || ||| || ||||| || ||||| || Sbjct 817241 GCT-TTGACTGCGTCCGTGCAG-CTTGCCA-AGGAGGAGGGTCCCTACTCCACCTTCAAG 817297 Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA----CCAA 105450 || ||||| || || |||| | ||||| || || |||| |||| |||| | || | Sbjct 817298 GGCTCTCCTGCCTCTGAAGGTATCCTTCAGTTCGACATGT-GGAACGTGAAACCTTCCGA 817356 Query 105451 GCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 ||| || |||||||| | ||| || | |||||||| | ||| | || ||||| Sbjct 817357 GCT---CTGGGACTGGGAGCCGCTCCGAGAGCAGGTCAAGGAGCACGGTATCCGCAACAG 817413 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 ||| ||| |||| || ||||| || || || | || ||| ||||||| || || || Sbjct 817414 TCTGCTCCTGGCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGGTAACAACGAGTG 817473 Query 105571 CTTTGAACCCTACACGACGAACATCTA 105597 ||| || || ||||| | |||||||| Sbjct 817474 CTTCGAGCCTTACACATCCAACATCTA 817500 >seq12 Length=1358207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 94789 ||||||| || || |||||| || || ||||| || |||| | | | |||| ||| Sbjct 114080 CAGTTCCTTGCATCAGAAAGAAGGCTGAGTGGGCATTGCGGTGGATCTCAGACAAGCAGT 114139 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | |||| ||| | || || | || ||||| || ||||| ||||||||| || Sbjct 114140 CCA---CCTTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTG 114196 Query 94850 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908 || | || ||| | || | |||||||||||||| || |||||||| ||| | |||| Sbjct 114197 GTGCTTT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTC 114255 Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || ||||| || ||||| ||||| ||||| || ||| Sbjct 114256 TCAAACGAACTGATCTCCCGTGATGAGGGCCTGCAC 114291 >seq10 Length=1519455 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || || || |||||||| | |||||| ||| || | |||| | | | || || Sbjct 586757 GGCGTCGATTTCGTCAATGAAAATGATGCAGGGTGCGTTCTTGCGACCCTCAGCGAATAG 586816 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821 ||| || || || || || |||||||||||||||||||| || | | || || Sbjct 586817 ATCTCGCACTCGTGAGGGACCAACACCAACAAACATCTCCACGAACTCAGAACCGCTCAC 586876 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 || | ||||| || ||| || || ||| | || |||||| ||||||||||| | Sbjct 586877 GCTGAAA-AAGGGAACGCCAGACTCGCCAGCAGTAGCCTTGGCGAGCAGAGTCTTACCAG 586935 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||| || || ||||| | ||| ||||| ||||||||||| || Sbjct 586936 TACCGGGAGGGCCAGCGAGAATGGCGCCTCGGGGAATCTTGGCTCC 586981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257198364560