Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4 242 4e-59
seq12 95.1 1e-14
seq10 95.1 1e-14
>seq4
Length=2550084
Score = 242 bits (268), Expect = 4e-59
Identities = 912/1407 (65%), Gaps = 59/1407 (4%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| ||||||| || | | ||||| || || ||||| || ||||
Sbjct 816122 CCACAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTC 816181
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || |||||| | || | || | ||||| | || ||||||||
Sbjct 816182 CTCGAGACCTACAACCTCATGTCCATGAAGTTTTTT-ACCCACGCCTCCCCCACCCTCTT 816240
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| |||||||| || ||||| | || |||||| | | | || ||||||||
Sbjct 816241 CAACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGA 816300
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | |||||||| | || || | | |||||| ||||| ||| ||||||
Sbjct 816301 CAGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGG 816360
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|| || || | || |||| | | || | || ||| || || ||
Sbjct 816361 TGGCATCGGTCTCAACGTCCACCGAATCCGCGCAACCGGTTCATACATTGCCGGTACCAA 816420
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|||| || ||||| | | || |||||||| || || ||| ||| || || || ||
Sbjct 816421 TGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTACGT 816480
Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637
| || | ||| ||| || || |||| |||| |||||||| ||||||||
Sbjct 816481 GGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCACGC 816540
Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCG 104697
||| || | |||||||| || | || ||||| || | || |||| || |||
Sbjct 816541 CGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGAGCCCG 816600
Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757
||| | ||| ||| || ||||| || ||||| ||||||||| | || ||| ||| ||
Sbjct 816601 TGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAGAACGG 816660
Query 104758 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGA 104817
| ||| ||||| | || || | || ||||| || ||||| | || |||||
Sbjct 816661 TGACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGATTGCTACGGCGAGGA 816720
Query 104818 GTTTGAAGCCCTTTACACAAAGTACGAGGAAG------AAGGTCGGGCGACTGCGACGGT 104871
|||||| ||| | || ||||| ||| | | | ||||| ||| || ||
Sbjct 816721 GTTTGAGGCCTTGTATGAGAAGTATGAGAAGGCCGGTAAGGGTCGCAAGACCATGAAGG- 816779
Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
|||| || | ||| | |||||||| | |||| || |||||||||| || |
Sbjct 816780 CCCAGAAGC-----TCTGGTACGCTATTCTTGAAGCTCAGACTGAGACTGGTAACCCCTT 816834
Query 104932 CATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||||||||| || | || |||| ||||| || || ||||| | || ||
Sbjct 816835 CATGCTTTACAAGGA-TCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACTATTC 816893
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| ||||| || || || |||||| | |||| | | | ||||| || || |
Sbjct 816894 GCAGCTCCAACCTGTGCACTGAAATCATCGAATACAGCGCCCCTGATGAAGTTGCCGTCT 816953
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATT 105110
| ||||| || || | || || || | || || | | | |||| || ||| ||
Sbjct 816954 GCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGTTGA-CTACA-ACAACGA---TTG-TT 817007
Query 105111 ATG------AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
||| |||| | ||||| ||||| | |||||| | ||||| |||| | |
Sbjct 817008 ATGACTTCCAAAAGTTGCACGAGGTTACCCAGACTGTCGTCCGCAACCTGAACAAGATCA 817067
Query 105165 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221
||||| || |||||| || |||| ||||| || || ||| | |||||||
Sbjct 817068 TTGATGTCAACCATTACCCTGTTCCTGAG---GCTCGCAACAGCAACATGCGCCACCGTC 817124
Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACG-CA 105277
| || ||| ||||||| |||||||| || |||| | ||| ||| || || | |
Sbjct 817125 CCATCGGTGTCGGTGTCCAGGGTCTTGCTGATG----CCTTCCTTGCCCTCCGCATGCCT 817180
Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337
||||| ||| || || || | || | || |||||||| || ||||||||
Sbjct 817181 TTTGAGTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTTGAGACTATCTATCACGCT 817240
Query 105338 GCTCTTGA-GGCG--AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394
||| |||| ||| || ||| ||| || ||| || ||||| || ||||| ||
Sbjct 817241 GCT-TTGACTGCGTCCGTGCAG-CTTGCCA-AGGAGGAGGGTCCCTACTCCACCTTCAAG 817297
Query 105395 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA----CCAA 105450
|| ||||| || || |||| | ||||| || || |||| |||| |||| | || |
Sbjct 817298 GGCTCTCCTGCCTCTGAAGGTATCCTTCAGTTCGACATGT-GGAACGTGAAACCTTCCGA 817356
Query 105451 GCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510
||| || |||||||| | ||| || | |||||||| | ||| | || |||||
Sbjct 817357 GCT---CTGGGACTGGGAGCCGCTCCGAGAGCAGGTCAAGGAGCACGGTATCCGCAACAG 817413
Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570
||| ||| |||| || ||||| || || || | || ||| ||||||| || || ||
Sbjct 817414 TCTGCTCCTGGCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGGTAACAACGAGTG 817473
Query 105571 CTTTGAACCCTACACGACGAACATCTA 105597
||| || || ||||| | ||||||||
Sbjct 817474 CTTCGAGCCTTACACATCCAACATCTA 817500
>seq12
Length=1358207
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 94789
||||||| || || |||||| || || ||||| || |||| | | | |||| |||
Sbjct 114080 CAGTTCCTTGCATCAGAAAGAAGGCTGAGTGGGCATTGCGGTGGATCTCAGACAAGCAGT 114139
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| |||| ||| | || || | || ||||| || ||||| ||||||||| ||
Sbjct 114140 CCA---CCTTCGCTCAACGCCTTGTTGCCTTTGCTGCAGTAGAGGGCATCTTCTTCAGTG 114196
Query 94850 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 94908
|| | || ||| | || | |||||||||||||| || |||||||| ||| | ||||
Sbjct 114197 GTGCTTT-TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTC 114255
Query 94909 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|| ||||| || ||||| ||||| ||||| || |||
Sbjct 114256 TCAAACGAACTGATCTCCCGTGATGAGGGCCTGCAC 114291
>seq10
Length=1519455
Score = 95.1 bits (104), Expect = 1e-14
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||| || || || |||||||| | |||||| ||| || | |||| | | | || ||
Sbjct 586757 GGCGTCGATTTCGTCAATGAAAATGATGCAGGGTGCGTTCTTGCGACCCTCAGCGAATAG 586816
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821
||| || || || || || |||||||||||||||||||| || | | || ||
Sbjct 586817 ATCTCGCACTCGTGAGGGACCAACACCAACAAACATCTCCACGAACTCAGAACCGCTCAC 586876
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
|| | ||||| || ||| || || ||| | || |||||| ||||||||||| |
Sbjct 586877 GCTGAAA-AAGGGAACGCCAGACTCGCCAGCAGTAGCCTTGGCGAGCAGAGTCTTACCAG 586935
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||| || || ||||| | ||| ||||| ||||||||||| ||
Sbjct 586936 TACCGGGAGGGCCAGCGAGAATGGCGCCTCGGGGAATCTTGGCTCC 586981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257198364560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |