Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4 419 3e-112 seq12 96.9 4e-15 >seq4 Length=2550084 Score = 419 bits (464), Expect = 3e-112 Identities = 1153/1745 (66%), Gaps = 69/1745 (4%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| ||||||||||| |||||| ||| | |||||| || | | |||| Sbjct 817839 TAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTG 817780 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | |||| | |||| ||||||||| ||||| || ||||| ||| | || || Sbjct 817779 CCCATGGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGATTGGTCAATGAAGGCGCCT 817720 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 |||||||| ||||| | || |||| || | ||||||||| | |||| ||| | Sbjct 817719 CGGTCGGCAGCCATCTGGACGACCTGGCGCTGGGAAATCTCCCACACGGTCTTGTAGAGA 817660 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGCTCGCACAATTT 78436 ||||| | || | |||||| | | ||| | | | ||| || |||| Sbjct 817659 GCCTTAACATCCGCGGGGATGTT--GGGGATGTTCTGGATGGAGCCGTCTTCAGCAATG- 817603 Query 78437 CATTCTTAATTTGAGGGT-TCCAGCGATTGATCT-TCTGAA---GATCCCGGACCAGGTG 78491 ||||| ||| | | ||| | || | | | | || ||||| || || | Sbjct 817602 -ATTCTGTTTTTCATAGCATCCGACCATAGGCCCATGTCAACGAGATCCTTGA---GGAG 817547 Query 78492 CC---GGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGT 78548 || |||| | | |||||||||||| ||| || || ||||||||||| || Sbjct 817546 CCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGACACGACGAGAGTAGATGTTGGATGT 817487 Query 78549 GTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGG 78608 ||| |||||||| ||||||||| |||| |||||| | || || || |||||||| Sbjct 817486 GTAAGGCTCGAAGCACTCGTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGG 817427 Query 78609 TGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGA-----TCTCG-ACCTTTAGGCC 78662 ||| | || ||| || || | ||| ||| ||||| ||||| | | | Sbjct 817426 TGCCAGGAGCAGACTGTTGCGGATACCGTGCTCCTTGACCTGCTCTCGGAGCGGCTCCCA 817367 Query 78663 GTCCCAAAATTCATTCGC---CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGA 78719 |||||| | || | | || ||| ||||||| ||||||||||| || || Sbjct 817366 GTCCCAGAGCTCGGAAGGTTTCACGTTCC---ACATGTCGAACTGAAGGATACCTTCAGA 817310 Query 78720 CGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATG-ACT 78778 || || || |||||||| || ||| | |||||||||||||| || | ||| | || Sbjct 817309 GGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCAAGCT-GCACGGACG 817251 Query 78779 CGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGG 78838 | || || ||||| || | || ||| ||||| ||||| ||||| || |||| | Sbjct 817250 CAGTCAAAGCAGCGTGATAGATAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAG 817191 Query 78839 TCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAG 78898 || || | | || ||| | |||| |||| || || |||||||| |||| | Sbjct 817190 GGGACTCAAAAGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACAC 817131 Query 78899 CGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGAT 78958 |||| || ||||||||||||||||| || || ||| | |||||| ||| || Sbjct 817130 CGATGGGACGGTGGCGCATGTTGCTGTTGCGAGCCTCAGGAACAGGGTAATGGTTGACAT 817071 Query 78959 CGATGACGCGGTTCAGGTTACGCGTGACGAC---CCGAGTCACCTCGTACAATTTGGCGA 79015 | |||| ||||||||| || |||||| | | || ||||||| ||| || || Sbjct 817070 CAATGATCTTGTTCAGGTTGCG---GACGACAGTCTGGGTAACCTCGTGCAACTTTTGGA 817014 Query 79016 AATCAAAATGATTTCCTTTG------ATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 | ||| || || ||| | ||| | || ||| |||||| || ||||||| Sbjct 817013 AGTCATAACAATCGTTGTTGTAGTCAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGC 816954 Query 79070 ACACGGCCGTCTCGTCCGGG---CTAGAAACCTCGATGATTTCTGTGCACAAATTAGA-- 79124 | ||||| || || ||| || | ||||||||||| ||||||| || || Sbjct 816953 AGACGGCAACTTCATCAGGGGCGCTGTAT---TCGATGATTTCAGTGCACAGGTTGGAGC 816897 Query 79125 --CGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTA-CAGGCGTCCTTGTA 79181 ||| || ||||||| |||||||||||||||||| ||| || | |||||||| Sbjct 816896 TGCGA----ATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGA-TCCTTGTA 816842 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 |||| | || | || |||||| |||| | |||| ||| ||||| | | | Sbjct 816841 AAGCATGAAGGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGAGCTTCTG 816782 Query 79242 GGCCCGGACAACCTT----CTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGT 79297 |||| | ||| | ||||| || | | | ||| || ||||| | | Sbjct 816781 GGCCTTCATGGTCTTGCGACCCTTACCGGCCTTCT----CATACTTCTCATACAAGGCCT 816726 Query 79298 TGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCC 79357 || |||| || ||| ||||| ||||| |||||||| | |||||||| || || Sbjct 816725 CAAACTCCTCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCC 816666 Query 79358 AGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417 |||| ||| |||||| || || |||||| || || |||||||| || || ||| | Sbjct 816665 AGTCACCGTTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAACA 816606 Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477 || ||| || | ||| || | || |||||| || || ||||| || || | || Sbjct 816605 AATCACGGGCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGA 816546 Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537 ||||||||||| ||||| || ||||||||||| | ||| |||||| ||| |||| Sbjct 816545 CATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCT 816486 Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597 ||| |||||||| || ||||||||||| || || |||||||| || || | || | Sbjct 816485 GGTCCACGTACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGG 816426 Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCG 79656 || || || ||| || || |||| | || || || | | | | || || ||| Sbjct 816425 TACCATTGGTACCGGCAATGTATGAACCGGTTGCGCGGAT-TCGGTGGACGTTGAGACCG 816367 Query 79657 ATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCG 79716 ||||| || | | ||||||||| || ||| |||||| || |||||||| ||||| Sbjct 816366 ATGCCACCAGCCATCTTGGAGATCATGGCACACGTCTTGAGGGTGTCGTAGATACCCTCA 816307 Query 79717 ATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCG 79776 || ||| |||||||| | |||| |||||| || | ||| || | ||||| Sbjct 816306 ATGCTGTCCTCCTTCATGTCAACCAAGAAGCATGAAGATAGCTGGGGCTGAGGGGTACCA 816247 Query 79777 GCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTC 79836 |||||||||||||| || | ||||| || || ||||| | ||| || | ||| ||| Sbjct 816246 GCGTTGAAGAGGGTGGGGGAGGCGTGGGTAAAAAACTTCATGGACATGAGGTTGTAGGTC 816187 Query 79837 TCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTAC 79896 || ||| ||| || ||| || || ||| || || | ||| ||||||| | || | Sbjct 816186 TCGAGGACACGCTCGATGTCATCACCCCAGATACCCACAGAGACACGCATGATCATGTGC 816127 Query 79897 TGGGG 79901 || || Sbjct 816126 TGTGG 816122 Score = 363 bits (402), Expect = 2e-95 Identities = 1150/1755 (66%), Gaps = 67/1755 (4%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||| | || || ||| || || ||| || ||| ||| Sbjct 816122 CCACAGCACATGATCATGCGTGTCTCTGTGGGTATCTGGGGTGATGACATCGAGCGTGTC 816181 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 | |||||| ||| |||| ||| | |||||| || || ||||| | || ||||| ||| Sbjct 816182 CTCGAGACCTACAACCTCATGTCCATGAAGTTTTTTACCCACGCCTCCCCCACCCTCTTC 816241 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 ||||| ||||| | || ||| | || || ||| | || | |||||||| ||| Sbjct 816242 AACGCTGGTACCCCTCAGCCCCAGCTATCTTCATGCTTCTTGGTTGACATGAAGGAGGAC 816301 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||||||||| |||||||| || |||||| ||| || ||||||||| | | || Sbjct 816302 AGCATTGAGGGTATCTACGACACCCTCAAGACGTGTGCCATGATCTCCAAGATGGCTGGT 816361 Query 19343 GGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 || ||||| || || | | | | ||||| | | ||| || || || || || Sbjct 816362 GGCATCGGTCTCAACGTCCACCGA-ATCCGCGCAACCGGTTCATACATTGCCGGTACCAA 816420 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || | ||| || ||| ||||| || |||||||||||||| || ||||||| Sbjct 816421 TGGTACCTCCAATGGTGTCACCCCCATGCTTCGTGTCTTCAACAACACTGCTCGGTACGT 816480 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 ||||||| ||| ||| || || | |||||||||||||| ||||| |||||||| Sbjct 816481 GGACCAGGGTGGCAACAAGCGACCCGGTGCTTTCGCCATCTACCTTGAGCCTTGGCACGC 816540 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || ||| | || |||||||| || ||| |||||| || | || ||| | || || Sbjct 816541 CGATGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGAAAGGAAGAGGTCCGAGCCCG 816600 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || | ||| || | ||||| || || || |||||| || || |||||| ||| Sbjct 816601 TGATTTGTTCCTCGCGCTATGGATCCCTGATCTGTTCATGAAGCGTGTCGAGAAGAACGG 816660 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || ||| || |||||||| | || ||||||||||| |||| ||||||||||| Sbjct 816661 TGACTGGACTCTCATGTGCCCCAATGAGTGCCCTGGCCTTGCCGATTGCTACGGCGAGGA 816720 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAG------AAGGTGGT 19755 ||| | | ||||| || || | || | ||||||| ||| ||| | Sbjct 816721 GTTTGAGGCCTTGTATGAGAAGTATG-AG---AAGGCCGGT--AAGGGTCGCAAGACCAT 816774 Query 19756 CCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815 ||||| | | ||||| || | || || ||| ||||| || | || | Sbjct 816775 GAAGGCCCAGAAGCTCTGGTACGCTATTCTTGAAGCTCAGACTGAGACTGGTAACCCCTT 816834 Query 19816 CATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAA 19875 |||| |||||||| || ||| |||| || ||||||||| ||||| | || Sbjct 816835 CATGCTTTACAAGGATCATGCCAACCGCAAGAGCAACCAGAAGAACCTCGGCACTAT--- 816891 Query 19876 GTCG----TCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCG 19931 ||| ||||||||||| ||||||||||| || | || || || ||||| Sbjct 816892 -TCGCAGCTCCAACCTGTGCACTGAAATCATCGAATACAGCGCCCCTGATGAAGTTGCCG 816950 Query 19932 TGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCG 19985 | || || || || || ||| |||||| | ||||| ||| | | | | Sbjct 816951 TCTGCAACCTTGCCTCGCTGGCCCTGCCTTCATTCGTTGACTACAACAACGATTGTTATG 817010 Query 19986 ACTTTGCCAAA--TTGTACGAGGTGACCCGG---GTCGTCACGCGTAATCTGAATCGCGT 20040 |||| ||||| ||| ||||||| |||| | |||||| || || ||||| | Sbjct 817011 ACTT--CCAAAAGTTGCACGAGGTTACCCAGACTGTCGTC---CGCAACCTGAACAAGAT 817065 Query 20041 CATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCC 20100 ||| ||| ||| |||||| | ||| ||||| || ||||||||||| || Sbjct 817066 CATTGATGTCAACCATTACCCTGTTCCTGAGGCTCGCAACAGCAACATGCGCCACCGTCC 817125 Query 20101 GATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGA 20160 |||| |||| |||||||| || || || | ||| | ||| || | | || || Sbjct 817126 CATCGGTGTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTTGCCCTCCGCATGCCTTTTGA 817185 Query 20161 CGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCT 20220 || |||| || ||||| ||||| ||||| ||| | | || ||||| || | Sbjct 817186 GTCCCCTGAGGCTCGTGAGCTGAACAAACAAATCTTTGAGACTATCTATCACGCTGCTTT 817245 Query 20221 -CCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGC 20279 ||| ||||| | || ||||| ||||| || || ||| || |||||||| || | Sbjct 817246 GACTGCGTCCGTGC-AGCTTGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTC 817304 Query 20280 CCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCA------CTGAG-AATGAG 20332 | || || || |||||||| ||| ||||||||| ||| | | ||| || | Sbjct 817305 CTGCCTCTGAAGGTATCCTTCAGTTCGACATGTGGAACGTGAAACCTTCCGAGCTCTGGG 817364 Query 20333 TTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTC 20392 | ||||| | ||| | || ||||| ||||| | |||||| ||||| | Sbjct 817365 ACTGGGAGC-CGCTCCGAGAGCAGGTCAAGGAGCACGGTATCCGCAACAGTCTGCTCCTG 817423 Query 20393 GCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCG 20452 || |||||||| || || || | |||||| |||| ||||||||| |||||||| Sbjct 817424 GCACCCATGCCTACTGCTAGTACATCTCAGATCCTGGGTAACAACGAGTGCTTCGAGCCT 817483 Query 20453 TACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAG 20512 ||||| |||||||||||| |||||| || ||||| |||||| || ||| ||| Sbjct 817484 TACACATCCAACATCTACTCTCGTCGTGTCCTTGCCGGCGAGTTC--CA-GGTTGTCAA- 817539 Query 20513 CACCTGG-TCCGCGA----CTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA-T 20566 | ||||| ||| | | || | | | || | | |||||| || || || Sbjct 817540 CCCCTGGCTCCTCAAGGATCTCGTTG-ACATGGGCCTATGGTCGGATGCTATGAAAAACA 817598 Query 20567 GAA--ATTGTCCGAGCCGGCGGGAGCGTCCAG-GCAT--TGGATATCCCCCAGAACCTCA 20621 ||| |||| | || | ||| | ||||| ||| | |||||| | | | | Sbjct 817599 GAATCATTG-CTGA--AGACGGCTCCATCCAGAACATCCCCAACATCCCCGCGGATGTTA 817655 Query 20622 AGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCG 20681 ||| | |||| |||||| ||||| || | ||| || || | ||||| |||| Sbjct 817656 AGGCTCTCTACAAGACCGTGTGGGAGATTTCCCAGCGCCAGGTCGTCCAGATGGCTGCCG 817715 Query 20682 ATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCC 20741 | || ||||||| ||| ||||| || ||||| ||||| || |||| | | || | | Sbjct 817716 ACCGAGGCGCCTTCATTGACCAATCTCAGTCCCTCAACATCCACATGAAAGACCCCACCA 817775 Query 20742 TGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGT 20801 ||| ||| | | | |||||| | ||||||| | || |||||||| ||||||| Sbjct 817776 TGGGCAAGATTACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGCATGT 817835 Query 20802 ACTATCTGCGGACCC 20816 |||| || || |||| Sbjct 817836 ACTACCTCCGTACCC 817850 >seq12 Length=1358207 Score = 96.9 bits (106), Expect = 4e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 || || ||||| || | || ||||| ||| || || || ||||||||| ||| | || Sbjct 114145 TTCGCTCAACGCCTTGTTGCCTTTGC-TGCAGTAGAGGGCATCTTCTTCAGTGGTGCTTT 114203 Query 60032 CTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGA 60091 | | || ||||||||||| ||||| ||||||||||| || ||| ||||| ||||| Sbjct 114204 TGCTTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTTTGACCTTCTCAAACGA 114263 Query 60092 GCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||| ||||| || |||||||| || Sbjct 114264 ACTGATCTCCCGTGATGAGGGCCTGCA 114290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521412859360