Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 257 2e-63
seq2 203 4e-47
seq5 152 6e-32
seq7 138 1e-27
seq8 123 3e-23
seq461 120 3e-22
>seq4
Length=2550084
Score = 257 bits (284), Expect = 2e-63
Identities = 963/1488 (65%), Gaps = 59/1488 (4%)
Strand=Plus/Minus
Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414
||||| || || ||| ||||| ||| || | ||| | ||||||||||| || |||
Sbjct 817527 AACTCGCCGGCAAGGACACGACG-AGAGTAGATGTTGGATGTGTAAGGCTCGAAGCACTC 817469
Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474
|||||| || |||||||||| || || || || ||||| || | | | ||| ||
Sbjct 817468 GTTGTTACCCAGGATCTGAGATGTACTAGCAGTAGGCATGGGTGCCAGGAGCAGACTGTT 817409
Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAAT-CTGACCAAAAATCAA--CCCCAAC 80531
|| | ||||||| ||||| | ||| || | || || | || | | |
Sbjct 817408 GCGGATACCGTGCTCCTTGACCTGCTCTCGGAGCGGCT--CCCAGTCCCAGAGCTCGGAA 817351
Query 80532 GCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589
| | | || |||||||||| ||| | ||| || || || || ||||| ||| |||
Sbjct 817350 GGTTTCACGTTCCACATGTCGAACTGAAGGATACCTTCAGAGGCAGGAGAGCCCTTGAAG 817291
Query 80590 GTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACG-ACTCCATAAGGGCCGCGTGATA 80648
|| ||| || |||||| |||||| |||| |||| || | | | || ||||||||
Sbjct 817290 GTGGAGTAGGGACCCTCCTCCTTGGCAAGCTG-CACGGACGCAGTCAAAGCAGCGTGATA 817232
Query 80649 AATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCC 80708
|| |||||||| ||||||| | || |||| ||| || || | || ||
Sbjct 817231 GATAGTCTCAAAGATTTGTTTGTTCAGCTCACGAGCCTCAGGGGACTCAAAAGGCATGCG 817172
Query 80709 CATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTT 80768
| | ||| | ||||| || ||||| || |||| |||| || ||||||||| |
Sbjct 817171 GAGGGCAAGGAAGGCATCAGCAAGACCCTGGACACCGACACCGATGGGACGGTGGCGCAT 817112
Query 80769 GTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGT 80827
||| | | || ||||| |||| |||||| ||| ||| |||| ||||||||
Sbjct 817111 GTT-GCTGTTGCGAGCCTCAGGAACAGGGTAATGGTTGACATCAATGATCTTGTTCAGGT 817053
Query 80828 TGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCG----AATTG--GTTCC 80881
|||| ||| | | ||||| || || | || || ||||| ||| | |||
Sbjct 817052 TGCGGACGACAGTCTGGGTAACCTCGTGCAACTTTTGGAAGTCATAACAATCGTTGTTGT 816993
Query 80882 CCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941
| || |||| || ||| ||| || || || ||||| ||||| || || ||||
Sbjct 816992 AGTCAACGAATGAAGGCAGGGCCAGCGAGGCAAGGTTGCAGACGGCAACTTCATCAGGGG 816933
Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001
| | | |||| |||||| ||||||| || || ||| || || ||||| ||||
Sbjct 816932 CGCTGTATTCGATGATTTCAGTGCACAGGTTGGAGCTGCGAATAGTGCCGAGGTTCTTCT 816873
Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061
|||| |||| |||| | |||||||| |||| | ||| |||| ||||| ||
Sbjct 816872 GGTTGCTCTTGCGGTTGGCATGATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCAGTCT 816813
Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121
| | | || || |||| ||| | || | ||||| | |||||| || ||
Sbjct 816812 GAGCTTCAAGAATAGCGTACCAGAGCTTCTGGGCCTTCATGGTCTTGCGACCCTTACCGG 816753
Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTG 81181
| | ||||||| | || | || |||| | |||| || | ||| | |
Sbjct 816752 CCTTCTCATACTTCTCATACAAGGCCTCAAACTCCTCGCCGTAGCAATCGGCAAGGCCAG 816693
Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241
||||||| || |||||||| || |||||| || ||||| ||| |||||||||
Sbjct 816692 GGCACTCATTGGGGCACATGAGAGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAACA 816633
Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGT 81301
||||||||||| || ||| ||||| || ||| || |||| || | || ||||
Sbjct 816632 GATCAGGGATCCATAGCGCGAGGAACAAATCACGGGCTCGGACCTCTTCCTTTCCGTGGT 816573
Query 81302 TGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGA 81361
| ||| | ||||| || || | || || || ||||| ||||| || || | |||||
Sbjct 816572 TCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGA 816513
Query 81362 TCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATA 81415
| || | |||| ||||||||||| ||||| || ||||| ||| || |
Sbjct 816512 AAGCACCGGGTCGCTTG---TTGCCACCCTGGTCCACGTACCGAGCAGTGTTGTTGAAGA 816456
Query 81416 CACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCT 81475
|||| | ||| ||| ||| ||||| || ||| || ||||| | || || ||
Sbjct 816455 CACGAAGCATGGGGGTGACACCATTGGAGGTACCATTGGTACCGGCAATGTATGAACCGG 816396
Query 81476 TGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533
| ||||| | | || ||| |||||||||||||| | | ||| || ||| ||
Sbjct 816395 TTGCGCGGATTCGGTGGACGTTG--AGACCGATGCCACCAGCCATCTTGGAGATCATGGC 816338
Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593
|||| || | ||| || || || ||||| ||||| || | |||||||||| ||||||
Sbjct 816337 ACACGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAA 816278
Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAG-----CCGGCATTGAACAGTGTTGGGGTCGCG 81648
|| || | ||| |||| |||| || || ||||| || || |||| |||
Sbjct 816277 GCATGAAGATAGCTG-GGGC----TGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCG 816223
Query 81649 TGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCA 81708
|| | ||| | | ||||| |||| ||||| || ||| || || || |||
Sbjct 816222 TGGGTAAAAAACTTCATGGACATGAGGTTGTAGGTCTCGAGGACACGCTCGATGTCATCA 816163
Query 81709 CCGTGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCG--------TCTCGCCT 81759
|| ||||| | || |||||||| | ||||| ||| || || ||| |||
Sbjct 816162 CCCCAGATACCCACAGAGACACGCATGATCATGTGCTGTGGTCGCTCGACAATCTTGCCA 816103
Query 81760 GCGTTC------AGGTAC-ATCTTCTGCAAAGTCTTGATGCCGAAGTA 81800
|| || |||||| ||| || || |||||||| |||||||||
Sbjct 816102 TCGATCTTAAGGAGGTACGATC-GCTCCAGAGTCTTGAAGCCGAAGTA 816056
>seq2
Length=4202288
Score = 203 bits (224), Expect = 4e-47
Identities = 185/231 (80%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || || ||||| |||||||| ||||| |||||| |
Sbjct 1893445 ATGCAAATCTTCGTCAAGACCTTAACTGGAAAGACCATTACTCTGGAGGTGGAGTCATCT 1893386
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||| |||| ||||||||||||||||| || || || ||||||
Sbjct 1893385 GATACCATCGACAATGTGAAGTCTAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 1893326
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || |||||||||||||| |||||||| | || ||||| ||| ||||| ||
Sbjct 1893325 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGAGC-GACTACAA 1893267
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||||||||| || || || ||| | ||||| || || || ||
Sbjct 1893266 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTCCGTCTCCGTGGCGGTCA 1893216
Score = 176 bits (194), Expect = 5e-39
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || || |||||||| || ||||||||||||||||| || | ||| |
Sbjct 1893661 GTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTTGAGTCCTCCGACACCATCGAC 1893602
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| ||||| | || || |||||||||||||| ||||| || |||||||||||||| |||
Sbjct 1893601 AATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATT 1893542
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| || || ||||| |||||||| | || || || | ||||| || | || ||||||
Sbjct 1893541 TTCGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAA 1893482
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||| || || || ||| |||| ||||| |||||
Sbjct 1893481 TCCACCCTCCACCTTGTCCTGCGACTTCGTGGTGG 1893447
Score = 154 bits (170), Expect = 2e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || ||||||||||| ||||| || | ||| | || | ||| |
Sbjct 1893933 ACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 1893874
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||| ||||| || |||||||||||||| || ||||||||||||
Sbjct 1893873 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTTATCTTTGCTGGTAAG 1893814
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||| | || ||||| | ||||| || |||| ||||| ||||| || ||
Sbjct 1893813 CAGCTTGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 1893754
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| || | ||||| || |||||
Sbjct 1893753 CTGGTTCTCCGTCTCCGTGGTGG 1893731
>seq5
Length=2272025
Score = 152 bits (168), Expect = 6e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || || ||||| || || |||||||| |||||
Sbjct 1174878 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 1174819
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| || || || ||||||
Sbjct 1174818 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1174759
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || |||||||||||||| |||||||| | || ||||| ||| ||||| ||
Sbjct 1174758 CAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGAGC-GACTACAA 1174700
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||| || || | ||| | || || || |||||
Sbjct 1174699 CATCCAGAAGGAGAGCACCCTCCACTTGGTCCTCCGCCTGCGTGGTGG 1174652
>seq7
Length=2071471
Score = 138 bits (152), Expect = 1e-27
Identities = 220/313 (70%), Gaps = 2/313 (1%)
Strand=Plus/Minus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GTC 32042
|| ||| |||||||| ||||||||||| |||||||||||| |||||| ||| || |||
Sbjct 1458524 GATGGCTTCAAGCCTGGTCAGCGCAAGGTTATATACGCCTGCTTCAAGAGGAATCTCGTC 1458465
Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102
| |||| |||||| | | || | || || || | || | ||||| || |||||
Sbjct 1458464 AAA-GACAAGAAGGTTGTTGAATTGGCAGGTTATGTTTCTGAAAACACGGCATACCACCA 1458406
Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162
||| ||| ||| || ||| || ||||| || || || || || |||| ||||
Sbjct 1458405 CGGTGAGATGTCCCTTCAGCAGACAATTGTTGGACTGGCCCAAAATTTCATCGGATCAAA 1458346
Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222
||| | |||| || |||||| |||| | || || | || || || |||||| |||
Sbjct 1458345 CAACATCAACTGCCTGGAGCCAAGTGGAAACTTCGGTTCTCGACTTGCTGGTGGCTCGGA 1458286
Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGA 32282
||||| ||| | ||||| || || || ||| | |||| | | ||||||||||||
Sbjct 1458285 CGCTGCTAGCGCTCGTTATATTTTTACTCGTTTGTCACCATTTGCACGCAAGATTTTCTC 1458226
Query 32283 CCCGTCGGACGAT 32295
|| | |||||||
Sbjct 1458225 TCCCTTGGACGAT 1458213
>seq8
Length=1962940
Score = 123 bits (136), Expect = 3e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || |||||||| || || |||||||| ||||| || | |||
Sbjct 146363 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 146422
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 146423 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 146482
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || || || ||||| || ||||||| || ||||| | ||||| || |||| |||
Sbjct 146483 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 146542
Query 27595 G 27595
|
Sbjct 146543 G 146543
>seq461
Length=561
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || | ||||| || || || || | ||||| ||| || |
Sbjct 130 ATGCAGATCTTTGTGAAAACCTTGACCGGAAAAACCATCACCTTGGAGGTGGAG--AGCT 187
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | || ||||||| || || ||||||||||| |||||||| |||||||
Sbjct 188 CCGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACC 247
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
| ||| | | || || || || || || || || || | | ||||| || ||||| |
Sbjct 248 AACAGAGATTGATCTTCGCCGGAAAACAGCTAGAAGACGGCAGAACCCTCGCCGACTACA 307
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| |||||||| || || ||| | ||| | ||||| || |||||
Sbjct 308 ACATCCAGAAGGAATCAACCCTCCATTTGGTCCTCCGTCTCCGTGGTGG 356
Score = 107 bits (118), Expect = 2e-18
Identities = 148/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| | || || ||||| |||||| | ||||| ||| || |
Sbjct 358 ATGCAGATTTTCGTGAAGACATTGACAGGGAAGACGATTACTTTGGAGGTGGAG--AGCT 415
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||||| || ||||||| || || |||||||||||||| || || |||||||
Sbjct 416 CCGACACCATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCACCAGACC 475
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||| | | || || || || || ||||| || || | || || | || || || |
Sbjct 476 AGCAGAGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGCCGGACTTTGGCGGATTACA 535
Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608
| |||| ||||| || || |||||
Sbjct 536 ACATCCAGAAGGAGTCGACGCTTCA 560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570306878333280
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