Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 >seq8 Length=1962940 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899 ||||| | | ||| || | ||| | ||| || || || | || |||| || |||||| Sbjct 1138359 GGAAACTGGCGGGGGTCACGCTCCAACTGTGTGTTGAGTGCATCGACGTGGTCGAGGTAG 1138418 Query 29900 ACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958 || ||||| || |||| | ||| | | || ||| || ||||| || ||||||||| Sbjct 1138419 ACATGAGCATCGCCCATGACGTGAGTTAGGCT-TCCTGGAACTAGCTCGCAGACGTGAGC 1138477 Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018 ||||||| ||| || | | |||||| || ||||| || || || ||||| ||||| || Sbjct 1138478 AATCATGTGCGTCAGCAATGCGTAGCTCGCAATGTTGAATGGAACACCGAGTCCCATATC 1138537 Query 30019 CCCCGACCTCTGGTAGAGCTGACA 30042 | || | ||| ||||||||||| Sbjct 1138538 GCAGGATCGCTGATAGAGCTGACA 1138561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307953757448