Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq8 100 2e-16
>seq8
Length=1962940
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899
||||| | | ||| || | ||| | ||| || || || | || |||| || ||||||
Sbjct 1138359 GGAAACTGGCGGGGGTCACGCTCCAACTGTGTGTTGAGTGCATCGACGTGGTCGAGGTAG 1138418
Query 29900 ACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29958
|| ||||| || |||| | ||| | | || ||| || ||||| || |||||||||
Sbjct 1138419 ACATGAGCATCGCCCATGACGTGAGTTAGGCT-TCCTGGAACTAGCTCGCAGACGTGAGC 1138477
Query 29959 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 30018
||||||| ||| || | | |||||| || ||||| || || || ||||| ||||| ||
Sbjct 1138478 AATCATGTGCGTCAGCAATGCGTAGCTCGCAATGTTGAATGGAACACCGAGTCCCATATC 1138537
Query 30019 CCCCGACCTCTGGTAGAGCTGACA 30042
| || | ||| |||||||||||
Sbjct 1138538 GCAGGATCGCTGATAGAGCTGACA 1138561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406307953757448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |