Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq461 104 2e-17
seq2 87.8 2e-12
>seq461
Length=561
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || ||| | |||||| | || ||||| |||
Sbjct 358 ATGCAGATTTTCGTGAAGACATTGACAGGGAAGACGATTACTTTGGAGGTGGAGAGCTCC 417
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| || || || ||||| || ||
Sbjct 418 GACACCATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCACCAGACCAG 477
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||| |||||| | |||||| | ||| | | |||||||||
Sbjct 478 CAGAGGTTGATCTTCGCCGGAAAACAACTTGAAGACGGCCGGACTTTGGCGGATTACAAC 537
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 538 ATCCAGAAGGAGTCGAC 554
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 27087 GAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGT 27146
||||| || || || ||||| || | || || | |||||| ||||| | |||||| |
Sbjct 1 GAAGGTATCCCCCCAGATCAGCAAAGATTGATCTTCGCCGGAAAACAGCTAGAAGACGGC 60
Query 27147 TCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTG 27206
||| | |||| |||||||| ||||||||||| ||| | |||||||| | ||| |
Sbjct 61 CGTACCCTCGCCGACTACAACATCCAAAAGGAGTCAACCCTCCATTTGGTCCTCCGTCTC 120
Query 27207 CGGGGTGGCAT 27217
|| ||||||||
Sbjct 121 CGTGGTGGCAT 131
>seq2
Length=4202288
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| || || || || |||||| | || |||||||| || || | |||||| | || ||
Sbjct 1893661 GTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTTGAGTCCTCCGACACCATCGAC 1893602
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| || || || || || ||||| || ||||| || || || || |||||| | ||
Sbjct 1893601 AATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATT 1893542
Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179
| |||||| || || | || ||| | || | ||||| ||||||||||| |||||
Sbjct 1893541 TTCGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAA 1893482
Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||| | || | || |||| | || ||||| ||
Sbjct 1893481 TCCACCCTCCACCTTGTCCTGCGACTTCGTGGTGGTAT 1893444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434915714378880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |