Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq8 87.8 2e-12
>seq8
Length=1962940
Score = 87.8 bits (96), Expect = 2e-12
Identities = 120/164 (73%), Gaps = 4/164 (2%)
Strand=Plus/Plus
Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAA 6605
|||| ||||| ||||||| ||| ||||| |||| |||| | ||| || ||||
Sbjct 1138401 TCGACGTGGTCGAGGTAGACATGAGCATCGCCCATGACGTGAGTTAG-GCTTCCT-GGAA 1138458
Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665
| | | | ||| ||||| ||||||| ||| |||| ||||| || ||||||||||| |
Sbjct 1138459 CTAGCTCGCAGACGTGAGCAATCATGTGCGTCAGCAATGCGTAGCTCGCAATGTTGAATG 1138518
Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
| || || | ||||| || | ||||| ||||||||||| |||
Sbjct 1138519 GAACACCGAGTCCCATATCGCAGGATCGCTGATAGAGCTGACAG 1138562
Score = 87.8 bits (96), Expect = 2e-12
Identities = 120/164 (73%), Gaps = 4/164 (2%)
Strand=Plus/Minus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
||| ||||||||||| ||||| | || ||||| | || || || ||||||||||| ||
Sbjct 1138562 CTGTCAGCTCTATCAGCGATCCTGCGATATGGGACTCGGTGTTCCATTCAACATTGCGAG 1138503
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
||||| |||| ||| ||||||| ||||| ||| | | | ||||| || |||
Sbjct 1138502 CTACGCATTGCTGACGCACATGATTGCTCACGTCTGCGAGCTAGTTCC-AGGAAGC-CTA 1138445
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGA 34797
| |||| |||| ||||| ||| ||||||| ||||| ||||
Sbjct 1138444 ACTCACGTCATGGGCGATGCTCATGTCTACCTCGACCACGTCGA 1138401
Score = 82.4 bits (90), Expect = 7e-11
Identities = 185/273 (68%), Gaps = 4/273 (1%)
Strand=Plus/Plus
Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806
||||||| || || || ||||| | || || ||||||||||||| || | ||
Sbjct 1138648 TGTGGCAAGGCGGAAGGACCATCTTGCGAAGGTCGGCCGGGTTCCACGCGGTCAGGATGA 1138707
Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGT-GTCGATCACGTACTGCA-GCTGGTCCGC 6864
| | ||| | ||||||| | ||| | || |||| | | ||| ||||||| |
Sbjct 1138708 GACGACGGTCGTAAGGGTTC-GTGCGAAGCTTGTGAATCAGCT-CAGCAAGCTGGTCGAC 1138765
Query 6865 TCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTG 6924
|||||| || | ||||| | | | | |||||| || |||||||||| ||||||
Sbjct 1138766 TCCCTGGCCGGTGTAGTCAGTCTTGTAGTCGACATACTCGGCGCCAAAGTGTCGCCACTG 1138825
Query 6925 GAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAG 6984
||| ||||| || ||||| | ||||||||||| || | | || | ||||||||
Sbjct 1138826 GAAGCCGTAAACGGGGCCAAGATCGCCCTCCTCACGGTGAGTTAGACCAAGGTTGTCCAG 1138885
Query 6985 AAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
|| || || || || | | |||||||||||
Sbjct 1138886 GAATTCGCGTGAGCCATTTCCATCCCAGATCTT 1138918
Score = 82.4 bits (90), Expect = 7e-11
Identities = 185/273 (68%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387
||||||||||| | | || || || || || |||||||| | || | | ||
Sbjct 1138918 AAGATCTGGGATGGAAATGGCTCACGCGAATTCCTGGACAACCTTGGTCTAACTCACCGT 1138859
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
||||||||||| | ||||| || ||||| ||||||||| |||||||||| || ||||||
Sbjct 1138858 GAGGAGGGCGATCTTGGCCCCGTTTACGGCTTCCAGTGGCGACACTTTGGCGCCGAGTAT 1138799
Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGC-TGCAGTACGTGATCGA 34506
| | | | ||||| | || ||||||| ||||||| ||| | | |||| |
Sbjct 1138798 GTCGACTACAAGACTGACTACACCGGCCAGGGAGTCGACCAGCTTGCTG-AGCTGATTCA 1138740
Query 34507 C-ACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565
| | ||| | ||||||| | ||| | | || | || ||||||||||||| |
Sbjct 1138739 CAAGCTTCGCAC-GAACCCTTACGACCGTCGTCTCATCCTGACCGCGTGGAACCCGGCCG 1138681
Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598
| || | ||||| || || || |||||||
Sbjct 1138680 ACCTTCGCAAGATGGTCCTTCCGCCTTGCCACA 1138648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448259631979680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |