Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq12 93.3 4e-14
>seq12
Length=1358207
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 4272 ACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAAC 4331
|| ||||| |||||||| || || ||||| | | ||||| ||||||||||| || ||
Sbjct 114581 ACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTTTCCATAAAGTCGAAG 114522
Query 4332 GGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACA 4391
|| || || | ||||| || ||| || || ||||| | || || |||||
Sbjct 114521 GGGTTCGTAGACTTGTACACCTTCTCATTGCCGAGGGCAACAAGAAGACGATCGGCTACG 114462
Query 4392 AATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACA-GGTAGCGC 4450
|| || ||||| || ||||||| ||| |||| || || | ||| |||| || |||||
Sbjct 114461 AACTCAATATATTGCTTCATGAGATCGGAGTTCATGCCGAGTAA-AGCACAGGGAAGCGC 114403
Query 4451 GTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498
| || | ||| || | || ||||| || || || ||||| |||||
Sbjct 114402 TTCAGTGAGAAATTCCTTCTCGATAGTGACAGCATCGGTGATGATATC 114355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047028894502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |