Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq8 104 2e-17
>seq8
Length=1962940
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165
||||| | | ||| || | ||| | ||| || || || | || ||||| || ||||||
Sbjct 1138359 GGAAACTGGCGGGGGTCACGCTCCAACTGTGTGTTGAGTGCATCGACGTGGTCGAGGTAG 1138418
Query 27166 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224
|| ||||| || |||| | ||| | | || ||| || ||||| || |||||||||
Sbjct 1138419 ACATGAGCATCGCCCATGACGTGAGTTAGGCT-TCCTGGAACTAGCTCGCAGACGTGAGC 1138477
Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284
||||||| ||| || | | |||||| || ||||| || || || ||||| ||||| ||
Sbjct 1138478 AATCATGTGCGTCAGCAATGCGTAGCTCGCAATGTTGAATGGAACACCGAGTCCCATATC 1138537
Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308
| || | ||| |||||||||||
Sbjct 1138538 GCAGGATCGCTGATAGAGCTGACA 1138561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369504975335714
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |