Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 >seq8 Length=1962940 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 ||||| | | ||| || | ||| | ||| || || || | || ||||| || |||||| Sbjct 1138359 GGAAACTGGCGGGGGTCACGCTCCAACTGTGTGTTGAGTGCATCGACGTGGTCGAGGTAG 1138418 Query 27166 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 || ||||| || |||| | ||| | | || ||| || ||||| || ||||||||| Sbjct 1138419 ACATGAGCATCGCCCATGACGTGAGTTAGGCT-TCCTGGAACTAGCTCGCAGACGTGAGC 1138477 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 ||||||| ||| || | | |||||| || ||||| || || || ||||| ||||| || Sbjct 1138478 AATCATGTGCGTCAGCAATGCGTAGCTCGCAATGTTGAATGGAACACCGAGTCCCATATC 1138537 Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308 | || | ||| ||||||||||| Sbjct 1138538 GCAGGATCGCTGATAGAGCTGACA 1138561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504975335714