Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016- 11-16] 494 sequences; 63,692,547 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 138 2e-27 >seq4 Length=2550084 Score = 138 bits (152), Expect = 2e-27 Identities = 406/614 (66%), Gaps = 14/614 (2%) Strand=Plus/Minus Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTG-CATGAGTCCTTATAAAGAATAAA 77818 |||||||| || || | ||||||||||| ||| ||||| ||||| ||||| || || Sbjct 816891 ATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGA-TCCTTGTAAAGCATGAA 816833 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT 77878 || | || || ||| |||| | ||| | ||||| | ||||| | ||| | || Sbjct 816832 GGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGA-GCTTCTGGGCCTT-- 816776 Query 77879 CATAGATTTGTATCGCCTCTCT--CTT-TCATATTGAGTATATA--GCCGTTCAAATTCA 77933 ||| | ||| | | | | ||| ||||| | ||| | ||| ||||| || Sbjct 816775 CATGGTCTTGCGACCCTTACCGGCCTTCTCATACTTCTCATACAAGGCC--TCAAACTCC 816718 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 || || | ||| | | |||||||| ||||| |||||||| | | ||||||||| Sbjct 816717 TCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCCAGTCACCG 816658 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053 | | || || || ||||| || |||||||| |||||||| || | || | ||| ||| Sbjct 816657 TTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAACAAATCACGG 816598 Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113 | || ||||| ||||| ||||| || ||||| ||||| | | ||| | Sbjct 816597 GCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCG 816538 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 ||||| || || || || || || | | | || ||||| || || || ||||| || | Sbjct 816537 TGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCCACG 816478 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 || | || ||||| || | || | | ||| || | | ||| || || || ||||| Sbjct 816477 TACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTG 816418 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCT 78293 || || | ||| || || ||||||| || | | | || || || || Sbjct 816417 GTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGTGGACGTTGAGACCGATGCCACCA 816358 Query 78294 GCCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTC 78352 |||||||| || || | || || ||| || | || |||||||||||||| || ||||| Sbjct 816357 GCCATCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTC 816299 Query 78353 ATCCATCATGTTAA 78366 ||| |||||| || Sbjct 816298 CTCCTTCATGTCAA 816285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664510420160