Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4 138 2e-27
>seq4
Length=2550084
Score = 138 bits (152), Expect = 2e-27
Identities = 406/614 (66%), Gaps = 14/614 (2%)
Strand=Plus/Minus
Query 77760 ATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTG-CATGAGTCCTTATAAAGAATAAA 77818
|||||||| || || | ||||||||||| ||| ||||| ||||| ||||| || ||
Sbjct 816891 ATAGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCATGA-TCCTTGTAAAGCATGAA 816833
Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT 77878
|| | || || ||| |||| | ||| | ||||| | ||||| | ||| | ||
Sbjct 816832 GGGGTTACCAGTCTCAGTCTGAGCTTCAAGAATAGCGTACCAGA-GCTTCTGGGCCTT-- 816776
Query 77879 CATAGATTTGTATCGCCTCTCT--CTT-TCATATTGAGTATATA--GCCGTTCAAATTCA 77933
||| | ||| | | | | ||| ||||| | ||| | ||| ||||| ||
Sbjct 816775 CATGGTCTTGCGACCCTTACCGGCCTTCTCATACTTCTCATACAAGGCC--TCAAACTCC 816718
Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993
|| || | ||| | | |||||||| ||||| |||||||| | | |||||||||
Sbjct 816717 TCGCCGTAGCAATCGGCAAGGCCAGGGCACTCATTGGGGCACATGAGAGTCCAGTCACCG 816658
Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053
| | || || || ||||| || |||||||| |||||||| || | || | ||| |||
Sbjct 816657 TTCTTCTCGACACGCTTCATGAACAGATCAGGGATCCATAGCGCGAGGAACAAATCACGG 816598
Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113
| || ||||| ||||| ||||| || ||||| ||||| | | ||| |
Sbjct 816597 GCTCGGACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCGAGGAACTCGAAGACATCGGCG 816538
Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173
||||| || || || || || || | | | || ||||| || || || ||||| || |
Sbjct 816537 TGCCAAGGCTCAAGGTAGATGGCGAAAGCACCGGGTCGCTTGTTGCCACCCTGGTCCACG 816478
Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233
|| | || ||||| || | || | | ||| || | | ||| || || || |||||
Sbjct 816477 TACCGAGCAGTGTTGTTGAAGACACGAAGCATGGGGGTGACACCATTGGAGGTACCATTG 816418
Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCT 78293
|| || | ||| || || ||||||| || | | | || || || ||
Sbjct 816417 GTACCGGCAATGTATGAACCGGTTGCGCGGATTCGGTGGACGTTGAGACCGATGCCACCA 816358
Query 78294 GCCATCTTAGATATTAGAGCGCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTC 78352
|||||||| || || | || || ||| || | || |||||||||||||| || |||||
Sbjct 816357 GCCATCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGTAGATACCCTCAATGCTGTC 816299
Query 78353 ATCCATCATGTTAA 78366
||| |||||| ||
Sbjct 816298 CTCCTTCATGTCAA 816285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694664510420160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |