Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 168 1e-36
seq461 154 3e-32
seq12 143 6e-29
seq8 143 6e-29
seq2 143 6e-29
>seq5
Length=2272025
Score = 168 bits (186), Expect = 1e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || |||| || | ||||| || || ||||||||||||||
Sbjct 1174651 ACCACCACGCAGGCGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1174710
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || || |||||||| | || || ||||| ||
Sbjct 1174711 CAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGG 1174770
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| ||||| |||| || ||
Sbjct 1174771 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 1174830
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||||||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 1174831 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 1174881
>seq461
Length=561
Score = 154 bits (170), Expect = 3e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| ||| | || ||| || |||||||||||||| ||
Sbjct 357 ACCACCACGGAGACGGAGGACCAAATGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 298
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || | ||| || ||||| ||||| ||||| |||||||| | |||||||| ||
Sbjct 297 GAGGGTTCTGCCGTCTTCTAGCTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGG 238
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
||| || |||||||| |||||||| || || ||| | ||||| |||| || |||| || |
Sbjct 237 AATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGT-CGGAGCTCTCCA 179
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || | ||||| || || || ||||| || || || || ||||||||
Sbjct 178 CCTCCAAGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATCTGCAT 130
Score = 141 bits (156), Expect = 2e-28
Identities = 148/192 (77%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || ||||||||||| || || | || ||||| || || |||||||| ||||| |||
Sbjct 548 TCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCGTCTTCAAGTTGTTTTCCGGCGAAG 489
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | || ||||| || || ||||||||||| |||||||| || || ||| |
Sbjct 488 ATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 429
Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || |||| || |||| || || || | ||| |||||||| || ||||| ||||| ||
Sbjct 428 TCAATGGTGT-CGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGTCAATGTCTTCAC 370
Query 283088 GAATATCTGCAT 283099
||| ||||||||
Sbjct 369 GAAAATCTGCAT 358
Score = 87.8 bits (96), Expect = 4e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || |||| ||| | || || ||||||||||||||||| ||
Sbjct 128 CCACCACGGAGACGGAGGACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGCG 69
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985
|| || ||||| || ||||| ||||| ||||| |||||||| | ||| || ||
Sbjct 68 AGGGTACGGCCGTCTTCTAGCTGTTTTCCGGCGAAGATCAATCTTTGCTGATC 16
>seq12
Length=1358207
Score = 143 bits (158), Expect = 6e-29
Identities = 142/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286
|||||||||| | ||||||||| ||||||||| || |||||||| |||||| || | |
Sbjct 114422 TCGGCATGAACTCCGATCTCATGAAGCAATATATTGAGTTCGTAGCCGATCGTCTTCTTG 114481
Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346
| || || || | ||||| ||||| || || | ||||||||||| |||||||| ||
Sbjct 114482 TTGCCCTCGGCAATGAGAAGGTGTACAAGTCTACGAACCCCTTCGACTTTATGGAAAACA 114541
Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCG 230406
|||| ||| || || || ||||||||||| ||||||||| | || ||||| | |||
Sbjct 114542 TTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAGAAAGCCG 114601
Query 230407 GTGT 230410
||||
Sbjct 114602 GTGT 114605
>seq8
Length=1962940
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || |||||||||||||| || || || ||||| ||||||
Sbjct 146541 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 146482
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || ||||| ||||| ||||||||||| |||||||| | || || | |||
Sbjct 146481 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 146422
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 146421 ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 146363
>seq2
Length=4202288
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || ||||| || | ||| || || |||||||||||||| |
Sbjct 1893730 ACCACCACGGAGACGGAGAACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1893789
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || |||||||| | ||| || ||||| ||
Sbjct 1893790 GAGGGTTCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGG 1893849
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | ||||| ||||| || | |||||
Sbjct 1893850 AATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 1893909
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| |||||||| ||||| |||||
Sbjct 1893910 CTCAAGAGTGATGGTCTTGCCCGT 1893933
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || || ||||||||||| |
Sbjct 1893446 ACCACCACGAAGTCGCAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGA 1893505
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| || |||| ||| || ||||| ||
Sbjct 1893506 CAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGGTCCGGGGG 1893565
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || || | ||||| ||||| || | || ||
Sbjct 1893566 AATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAGGACTCAAC 1893625
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| |||||||| ||||| || || | ||||| ||||
Sbjct 1893626 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 1893663
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | ||| ||| || || |||||||||||
Sbjct 1893218 ACCGCCACGGAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGCT 1893277
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || || |||||||| | ||| || ||||| ||
Sbjct 1893278 CAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGG 1893337
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| || ||||| | || || | ||||| || || || | || ||
Sbjct 1893338 GATACCCTCCTTGTCCTGAATCTTAGACTTCACATTGTCGATGGTATCAGATGACTCCAC 1893397
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| || ||||| || || || ||||| ||||| || |||||
Sbjct 1893398 CTCCAGAGTAATGGTCTTTCCAGTTAAGGTCTTGACGAAGATTTGCAT 1893445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046732574795076
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