Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudoreteaudii_20[genbank_20GCA_5F001879505.1_202016-
11-16] 494 sequences; 63,692,547 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 5e-30
seq461 129 4e-25
seq2 129 4e-25
seq8 118 8e-22
>seq5
Length=2272025
Score = 145 bits (160), Expect = 5e-30
Identities = 160/211 (76%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||||||||||| ||||||||||| ||| || ||| |||| ||
Sbjct 1174670 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCG 1174729
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | |||||||| || | || | || ||||| |||
Sbjct 1174730 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1174789
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| || |||||||| | || |||||||
Sbjct 1174790 ATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCT 1174847
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| |||||||||||||| |||||||| |||||
Sbjct 1174848 TCCCCGTGAGGGTCTTGACGAAGATCTGCAT 1174878
>seq461
Length=561
Score = 129 bits (142), Expect = 4e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193
||||||||| |||||| |||||||||||||| || | || |||| || || ||
Sbjct 561 GTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGCCGTCTTCAAGTTG 502
Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253
|| ||||| |||||||| | |||||| |||| || | || ||||| ||| |||||
Sbjct 501 TTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTT 442
Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313
| ||||| | | |||||||||| | |||||||||| ||||||||||| || ||
Sbjct 441 CGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCTGT 382
Query 44314 GAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||||||| || |||||
Sbjct 381 CAATGTCTTCACGAAAATCTGCAT 358
Score = 120 bits (132), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAA 44204
||||| ||||||||||| |||||||| || || |||| || ||||| || ||||| |
Sbjct 320 TCCTTCTGGATGTTGTAGTCGGCGAG--GGTTCTGCCGTCTTCTAGCTGTTTTCCGGCGA 263
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
||||||| | ||| || |||| || | |||||||| ||| ||||| |||||
Sbjct 262 AGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGT 203
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
| | |||||||||| | |||||||||| || || || ||||| || | ||| ||||
Sbjct 202 TGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTTTTTCCGGTCAAGGTTTTCA 143
Query 44325 CGAAGATTTGCATG 44338
| ||||| ||||||
Sbjct 142 CAAAGATCTGCATG 129
Score = 82.4 bits (90), Expect = 5e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||||||||||||||| |||||||| || |||| || ||||| || ||||| ||
Sbjct 93 CTCCTTTTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCTAGCTGTTTTCCGGCGAA 34
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
|||||| | |||||||||| || | ||||||
Sbjct 33 GATCAATCTTTGCTGATCTGGGGGGATACCTTC 1
>seq2
Length=4202288
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| ||||| || |||||||| ||| || ||| |||| ||
Sbjct 1893237 ACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCG 1893296
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | ||||||||| || | || | ||| ||||| |||
Sbjct 1893297 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGA 1893356
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | ||||| || | || |||||||||| ||||| ||||||
Sbjct 1893357 ATCTTAGACTTCACATTGTCGATGGTATCAGATGACTCCACCTCCAGAGTAATGGTCTTT 1893416
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||| ||||||||||||||
Sbjct 1893417 CCAGTTAAGGTCTTGACGAAGATTTGCAT 1893445
Score = 120 bits (132), Expect = 2e-22
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | |||| || || ||||| || ||| ||||| || ||||||||
Sbjct 1893440 TTGCATACCACCACGAAGTCGCAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTA 1893499
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| || ||| |||| || |||||||| ||||| || |||| ||||||||| ||
Sbjct 1893500 GTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGACGCTGCTGGTC 1893559
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
| || | || ||||| ||| ||||| ||||| | | |||||||||| |||
Sbjct 1893560 CGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAGGA 1893619
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
|| ||||| | || || ||||| || ||||||||||| ||||
Sbjct 1893620 CTCAACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 1893663
Score = 113 bits (124), Expect = 3e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| |||||| ||||||||||| |||| ||| || |||| ||
Sbjct 1893749 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCA 1893808
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | ||||||||| || | || | || ||||| |||
Sbjct 1893809 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 1893868
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| ||| || ||||| | || || |||||
Sbjct 1893869 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 1893928
Query 44309 CCCGTGA 44315
|||||||
Sbjct 1893929 CCCGTGA 1893935
>seq8
Length=1962940
Score = 118 bits (130), Expect = 8e-22
Identities = 137/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| ||| ||| | || || |||||||| ||||| ||||
Sbjct 146543 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 146484
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | || ||||| ||| ||||| ||| || |||
Sbjct 146483 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 146424
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| |||||||||||||||||
Sbjct 146423 --CGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 146366
Query 44326 GAA 44328
|||
Sbjct 146365 GAA 146363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988232632798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |