Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq101 109 1e-18 >seq101 Length=586485 Score = 109 bits (120), Expect = 1e-18 Identities = 177/252 (70%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 |||| || || || ||||| | || | |||||| | ||| ||| |||| ||| | Sbjct 138177 TCATCACCGAGGCTGTTGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCTC 138236 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | ||||||||||| ||||| ||| || ||||| || ||||| || || || | Sbjct 138237 TTCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGTCTC 138295 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || | || || | ||||| || ||||| || ||||| || | ||||||||| Sbjct 138296 CTCCTTTCCCTCGGCAATGAGAAGGTTTACAAGGTTACCAACCCATTCGACTTTATGGAG 138355 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || ||| || |||||||||||||| |||||||||||| ||| || || | | Sbjct 138356 AACATCTCTCTTGCCGGAAAGACCAACTTCTTTGAAAAGCGTGTCGCTGATTACCAAAAG 138415 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 138416 GCCGGTGTCATG 138427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816830267270