Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq76 217 4e-51 >seq76 Length=131010 Score = 217 bits (240), Expect = 4e-51 Identities = 1108/1740 (64%), Gaps = 56/1740 (3%) Strand=Plus/Minus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 || || || || |||||| | ||||||||||| | || || || | |||| | || Sbjct 91860 GAGCGTCCACAACATATGATTATGCGTGTTGCGGTGGGAATACACGGTGAGGATATCGAG 91801 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGC-TCGTGTA-TTCACGCACGCCACGCCAA 363565 || || || || || || || ||| | || | | || ||||| |||||| | || | Sbjct 91800 GCTGCCATCGAGACCTACAA-CTT-GATGTCCAGCAAATACTTCACCCACGCCTCCCCCA 91743 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | | ||||| || | | |||| | || || ||||| || | | |||| Sbjct 91742 CCCTTTTCGCAGCTGGTACACCACAGGCACAACTTTCATCCTGCTTCCTGATCGACATGA 91683 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || ||| || ||||| | |||||| | |||| ||||||| | ||||| |||| Sbjct 91682 AGGAGGACAGCATTGATGGTATTTACGACACATTGAAGATTTGTGCTATGATTTCAAAGA 91623 Query 363686 ATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 | || || || || ||| | | || | |||| | ||||| || | ||| ||| Sbjct 91622 ACGCTGGTGGTATCGGTCTCAACG-TTCACAGAATCCGTGCTACTG-GTGCTTATATTGC 91565 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||| || ||| |||| || || | ||||| ||||| | || ||| |||| || || Sbjct 91564 CGGTACCAACGGAAACTCCAACGGAATCGTTCCTATGCTCAGAGTTTTTAACAACACCGC 91505 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 || || || || || ||||| ||||| || || || || || || || ||||| Sbjct 91504 CAGATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCTTTCGCCATCTACCTTGAGCC 91445 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 || |||||| |||| ||||| || || ||||| || ||| ||||| ||||| | Sbjct 91444 ATGGCACGCCGATGTTTTCGAGTTCCTCGACCTCCGAAAGAACCACGGAAAGGAGGAGGT 91385 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| |||||||| || || || || ||| || | || | || |||||||| || || Sbjct 91384 TCGTGCCCGTGATCTCTTTTACGCTCTCTGGATTCCAGATCTCTTCATGAAGCGTGTTGA 91325 Query 363984 GGCAGGTAAGA------ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 |||| | ||| || | | ||||| |||| ||||| ||| | |||| Sbjct 91324 ------AAAGAACCTCGACTGGACATTGATGTGCCCTAACGAGTGTCCTGGTTTGGCCGA 91271 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 ||| | |||||||| | | || | || || || || || || ||||| |||| ||| Sbjct 91270 TGTCTACGGTGACGAGTTCGAAGCGTTGTATGAGAAATACGAGTCTGAGGGCAAGGGTCG 91211 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 |||| || || || ||||| |||| | || | || | || | |||||| || Sbjct 91210 CAAGAGCATCAAAGCCCAAAAGCTTTGGTACTCTATTCTTGAGGCTCAAACTGAGACCGG 91151 Query 364158 AACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 || ||||| | ||| | ||||| ||| | |||||||| ||| |||||| || | || | Sbjct 91150 AA-ACCCTTTCATGCTTTACAAGGATGCTTGCAACCGAAAGAGCAACCAAAAGAATCTCG 91092 Query 364217 GTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 |||| | || | || |||| | || || |||||| | || ||| || || || ||| Sbjct 91091 GTACCA-TCCGAAGCTCCAACTTGTGCACTGAGATTGTCGAGTACTGTGCACCAGATGAG 91033 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-----AAAAGA-TGGT 364329 || || || | |||||| | || || || | | ||| | |||| || Sbjct 91032 GTCGCTTGTTGCAATTTGGCGTCGCTTGCTCTCCCAACATATGTCGACGAGAAGACTGCC 90973 Query 364330 ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA--ATCTCG-AC 364386 |||| ||| |||| | ||| | || || || || | | || | || | || Sbjct 90972 ACTTATGATTTCCAGAAGCTTCACGAGGT---CTGCCAAGTTGTCGTCAAGAACTTGAAC 90916 Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCA 364445 ||| ||||||| || || || ||| ||||||| || || | | ||| | ||||| Sbjct 90915 AAGATTATCGATGTCAACTACTACCCAGTTCCTGAGGCAAGAAAGAGC-AATTTCCGTCA 90857 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505 | || |||| ||| ||||| || || || ||||| | || || || | | Sbjct 90856 CAGACCTATTGCTCTCGGTGTTCAAGGTCTTGCTGATGCCTTCTTGGCTCTTCGTCTTCC 90797 Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565 ||||| || || || || || || | | || || || || || || || Sbjct 90796 TTTTGAGTCTCCAGAGGCCAAGCACCTTAACATTCAAATTTTCGAGACCATTTACCACGC 90737 Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || |||||||||| || |||||||| | | || || || ||| | || Sbjct 90736 TGCTTTGACTGCTTCCATGGAGTTGGCAAAGATTCATGGTCCATATGAGACATATCAAGG 90677 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 || ||| || |||| | |||| | ||| | ||| |||||| || | | | Sbjct 90676 CTCGCCTGCCTCTAAGGGCGAGCTCCAATATGACATGTGGGGTGTCACACCTACCGATCT 90617 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAAC-- 364737 ||| | |||| || ||| | |||| ||| | || |||| || ||| Sbjct 90616 TTGGGATTGGGCTA-GCT-TGAAGCAAC----AGATCGCTCAACACGGTATCCGTAACAG 90563 Query 364738 -TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGA 364796 | ||||| || || ||||| || || ||| || || || ||| |||||| Sbjct 90562 TTTGCTCGT---CGCTCCTATGCCAACAGCCAGTACCAGTCAAATTCTTGGATTCAACGA 90506 Query 364797 GTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCC 364856 ||||||||| || | ||| ||| | || || || || || ||| | |||||||| | Sbjct 90505 GTGCTTCGAGCCATATACCTCCAACATCTACTCTCGACGTGTCCTTGCTGGAGAATTCCA 90446 Query 364857 GGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCAT 364916 || || || | || |||||||||| ||| || || ||| |||| ||| Sbjct 90445 AGTTGTCAACCCATGGCTTCTCAAGGATCTCGTCGATATGGGACTTTGGTCCGACAACAT 90386 Query 364917 GAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGA 364976 ||||||| |||||| || | | ||| || | || || ||||| | |||| || Sbjct 90385 GAAGAACCGTATCATTGCTGATGGTGGATCAATCCAAAATGTTCCAAACATCCCAGCTGA 90326 Query 364977 TCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGC 365036 | | ||| || ||||||| ||||| ||||| || || || || || | | ||||| Sbjct 90325 TATCAAGGCTCTTTACAAGACCGTTTGGGAGATCTCACAACGTACCATCGTCCAGATGGC 90266 Query 365037 GGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCC 365096 ||||| || ||||| || || ||| || || | ||| | ||||| | || Sbjct 90265 TGCCGACCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATCCACATGAAGGACCC 90206 Query 365097 AACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | ||| | || ||||||||| || ||||| | ||||| ||||| || Sbjct 90205 AACCATGGGTAAGATCACCAGTATGCATTTCGCAGGCTGGAAGTTGGGTCTCAAGACTGG 90146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344766113678