Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq76 187 3e-42 seq101 132 6e-26 >seq76 Length=131010 Score = 187 bits (206), Expect = 3e-42 Identities = 1124/1779 (63%), Gaps = 49/1779 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||| ||||||||| || ||| | | ||||| |||||||| || |||||||| | Sbjct 90099 TGAATTGAATGGGTGCCGAGGCAGCCATAGTACGGAGATAGTACATTCCAGTCTTGAGAC 90158 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 || ||||||| | | |||||| || | ||| | ||||| | |||| Sbjct 90159 CCAACTTCCAGCCTGCGAAATGCATACTGGTGATCTTACCCATGGTTGGGTCCTTCATGT 90218 Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705 || |||||| ||| |||||||| ||||| || || || || ||||| | | | Sbjct 90219 GGATGTTCATTGATTGAGATTGATCAATGAATGCACCACGGTCGGCAGCCATCTGGACGA 90278 Query 115706 CATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 115763 | | | | ||| | ||||| || || |||| || ||| |||||| ||||||| Sbjct 90279 --TGGTACGTTGTGAGATCTCCCAAACGGTCTTGTAAAGAGCCTTGATATCAGCTGGGAT 90336 Query 115764 ATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGA 115823 | | ||||||||| || ||||| | | || | | |||||| | | || Sbjct 90337 GTTTGGAACATTTTGGATTGATCCACCATCAGCAATGATACGGTTCTTCATGTTGTCGGA 90396 Query 115824 CCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACC 115883 ||| || || || | |||||||| | || |||||||| || || || Sbjct 90397 CCAAAGTCCCATATCGACGAGATCCTTGAGAAGCCATGGGTTGACAACTTGGAATTCTCC 90456 Query 115884 CGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 115942 || ||| |||| ||| |||||||||| || |||||||| |||||||| ||| | Sbjct 90457 AGCAAGGACACGTCG-AGAGTAGATGTTGGAGGTATATGGCTCGAAGCACTCGTTGA-AT 90514 Query 115943 CCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGA 116001 |||||| || | ||| | |||||| ||||| || || | ||| | ||||| |||| | Sbjct 90515 CCAAGAATTTGACTGGTACTGGCTGTTGGCATAGGAGCGACGAGCAAACTGTTACGGATA 90574 Query 116002 CCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT--GTCTCCC 116059 || || ||| ||| | | |||| || | || | | || | | Sbjct 90575 CCGTGTTGAGCGATCTGTTGCTTCAAGCTAGCCCAATCCCAAA-GATCGGTAGGTGTGAC 90633 Query 116060 CCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 116119 | ||||||| ||| | ||||| || | || || ||||| || | | ||||||||| Sbjct 90634 AC-CCCACATGTCATATTGGAGCTCGCCCTTAGAGGCAGGCGAGCCTTGATATGTCTCAT 90692 Query 116120 ATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCT 116179 |||| || | || || ||||| || | || | || ||||| || || |||| Sbjct 90693 ATGGACCATGAATCTTTGCCAACTCCATGGAAGCAGTCAAAGCAGCGTGGTAAATGGTCT 90752 Query 116180 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--GCACAA 116237 | ||||| || || | ||||||||| || ||||| | ||||| | | | Sbjct 90753 CGAAAATTTGAATGTTAAGGTGCTTGGCCTCTGGAGACTCAAAAGGAAGACGAAGAGCCA 90812 Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297 | || |||| || |||||||| |||||||| |||| || | || | | ||| Sbjct 90813 AG--AAGGCATCAGCAAGACCTTGAACACCGAGAGCAATAGGTCTGTGACGGAAATTGCT 90870 Query 116298 CTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 ||||| || ||| || || || | || |||||||| | | || | || || Sbjct 90871 CTTTCTTGC---CTCAGGAACTGGGTAGTAGTTGACATCGATAATCTTGTTCAAGTTCTT 90927 Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 | |||||| | || || |||||||| | | ||||| || || ||||| || | Sbjct 90928 GACGACAACTTGGCAGACCTCGTGAAGCTTCTGGAAATCATAAGTGGCAGTCTTCTCGTC 90987 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 |||||| | || || || | ||||||| ||| || || | |||||| || Sbjct 90988 GACATATGTTGGGAGAGCAAGCGACGCCAAATTGCAACAAGCGACCTCATCTGGTGCACA 91047 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 |||||| | ||| || || ||||| || || || ||||| || | |||||||| || Sbjct 91048 GTACTCGACAATCTCAGTGCACAAGTTGGAGCTTCGGATGGTACCGAGATTCTTTTGGTT 91107 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 |||| ||| || ||||||||||| ||||| | || | || ||||| ||||| | Sbjct 91108 GCTCTTTCGGTTGCAAGCATCCTTGTAAAGCATGAAAGGGTTTCCGGTCTCAGTTTGAGC 91167 Query 116595 CTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---C 116651 || ||||||| | ||| | | |||| | || ||| || |||| | Sbjct 91168 CTCAAGAATAGAGTACCAAAGCTTTTGGGCTTTGA---TGCTCTTG---CGACCCTTGCC 91221 Query 116652 CTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCC 116708 ||| |||||| || || | || || ||||| ||||| | || | | || Sbjct 91222 CTCAGACTCGTATTTCTCATACAACGCTTCGAACTCGTCACCGTAGACATCGGCCAAACC 91281 Query 116709 TGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 116768 || || | || || | | | ||| | || ||||| ||||||||||| Sbjct 91282 AGGACACTCGTTAGGGCACATCAATGTCCAGTCGAGGTTCTTTTCAACACGCTTCATGAA 91341 Query 116769 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 116828 ||| ||||| |||||||| || | |||||||| || ||| | || || | || || Sbjct 91342 GAGATCTGGAATCCAGAGAGCGTAAAAGAGATCACGGGCACGAACCTCCTCCTTTCCGTG 91401 Query 116829 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 116888 || || | || | || || | | ||| |||||||| || || ||||| | || Sbjct 91402 GTTCTTTCGGAGGTCGAGGAACTCGAAAACATCGGCGTGCCATGGCTCAAGGTAGATGGC 91461 Query 116889 GATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAA 116942 || | || | |||| |||| | || | ||||| || || || |||||| Sbjct 91462 GAAAGCACCAGGACGCTTG---TTACCACCTTGATCAACATATCTGGCGGTGTTGTTAAA 91518 Query 116943 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACT 117001 || | ||||| |||| ||| || | || | || || || || |||| || || Sbjct 91519 AACTCTGAGCATAGGAACGATTCCGTTGGAGTTTCCGTTGGTACCGGCAATATAAGCACC 91578 Query 117002 TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTG 117061 | | || | || ||| | || | ||| ||||| || || |||||| || | Sbjct 91579 AG-TAGCACGGATTCTGTGAACGTTGAGACCGATACCACCAGCGTTCTTTGAAATCATAG 91637 Query 117062 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 117121 | || | | | || |||| || ||||| || ||| |||| | |||| |||| Sbjct 91638 CACAAATCTTCAATGTGTCGTAAATACCATCAATGCTGTCCTCCTTCATGTCGATCAGGA 91697 Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181 ||||| || | ||||| | |||||||||||| ||| ||||| || | |||||| Sbjct 91698 AGCAGGATGAAAGTTGTGCCTGTGGTGTACCAGCTGCGAAAAGGGTGGGGGAGGCGTGGG 91757 Query 117182 TGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCC 117239 |||| || ||| ||||||| | ||||||||| | | ||| || || || || Sbjct 91758 TGAA-GTA-TTTGCTGGACATCAAGTTGTAGGTCTCGATGGCAGCCTCGATATCCTCACC 91815 Query 117240 GTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 ||| || || | | || ||||||| ||| | ||| || Sbjct 91816 GTGTATTCCCACCGCAACACGCATAATCATATGTTGTGG 91854 >seq101 Length=586485 Score = 132 bits (146), Expect = 6e-26 Identities = 303/451 (67%), Gaps = 4/451 (1%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || |||| ||||| || |||||||| ||||| || | || ||| |||||||| Sbjct 138409 GTAATCAGCGACACGCTTTTCAAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTCCAT 138350 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 127349 ||| || |||||||| | || ||| || || || | |||||||| Sbjct 138349 AAAGTCGAATGGGTTGGTAACCTTGTAAACC-TTCTCATTGCCGAGGGAAAGGAGGAGAC 138291 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 |||| | |||| |||||||||| | |||| | | |||||| |||| || || Sbjct 138290 GATCAGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGAAGAGCAC 138231 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || || || || | |||| | | |||||| || ||||| || | || ||| | Sbjct 138230 AAGGAAGAGCCTCAGTCAAGAACTCTTGCTCAATCTCAACAGCCTCGGTGATGACGGCCT 138171 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAACTCT 127528 | | | || | || | || || | |||| |||||| || || || Sbjct 138170 GGACTGCTGCCTTGCTTGGGCGAT-GCTTCAAGTGGGAGAAGAGAAGGCATGCGAAGTCA 138112 Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588 ||| |||||||||||||||||||| | || || |||||| ||||| | |||||| Sbjct 138111 GTGTGCAGACCCTCGTCACGGGAGATCAACTCGTTGGAGAAGGTAAGACCAGCCATGAGG 138052 Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 || ||||||||||||||||| || | || |||||| ||||||||| ||||| ||| Sbjct 138051 CCACGCTTCTTCAACCAGAAGATGGAGGCGAAAGAGCCACTGAAGAAGATACCCTCAACA 137992 Query 127649 CACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| |||| ||||| | |||||||| Sbjct 137991 GCGGCGAAGGCAACAAGACGTTGGGCAAAGG 137961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503143183640