Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq400 89.7 4e-13 >seq400 Length=416305 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 107566 TTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCG 107625 ||||||| || || || ||||| ||||| ||| |||| |||| | |||||| ||| Sbjct 399338 TTGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCATCGGATACTATCG 399397 Query 107626 GCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTA 107685 | | || || |||||| || || || ||| | || ||| || || | |||| Sbjct 399398 ACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCGGACCAACAACGTCTTA 399457 Query 107686 TTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGG 107745 | | ||| ||||| || || ||||||| | || | ||||||||||||| || |||| Sbjct 399458 TCTTTGCTGGTAAGCAACTTGAGGACGGCCGCACTCTTTCGGACTACAACATCCAGAAGG 399517 Query 107746 AGTCTACGTTGCACATGGT 107764 | ||||| ||||| |||| Sbjct 399518 AATCTACTCTGCACTTGGT 399536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874228366481