Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calycina_20herbarum_20[genbank_20GCA_5F001414485.1_202015-10-27] 529 sequences; 69,308,136 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq101 95.1 4e-14 >seq101 Length=586485 Score = 95.1 bits (104), Expect = 4e-14 Identities = 126/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | | | || || || || || || | || || || | || || || ||| Sbjct 137959 CACCTTTGCCCAACGTCTTGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGCT- 138017 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| |||||||||||||||||||| |||||||| || ||| ||||| ||||| | Sbjct 138018 CTTTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGGCTGGTCTTACCTTCTCCA 138077 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 |||| ||||| || ||||||||| |||| |||||||| || ||||||| Sbjct 138078 ACGAGTTGATCTCCCGTGACGAGGGTCTGCACACTGACTTCGCATGCCTTCTCT 138131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588325234556405