Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 4e-18
>seq1
Length=398088
Score = 107 bits (118), Expect = 4e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
|||||||| | || ||| | || || ||| | ||||||||| | || |||
Sbjct 36883 AGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACTCGACGCTCATGA 36942
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
|||||||| || || || ||||| ||| | | ||| | || || |||| || ||||
Sbjct 36943 AGCAGTACATTGAGTTTGTGGCCGATCGCCTGCTGGTTTCTCTCGGCAACGACAAGGTGT 37002
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|| ||| | |||||||||| || |||||| ||| || || || ||||||||||
Sbjct 37003 ACCGCTCGAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACT 37062
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||| || ||||||||| | ||||| |||| | | ||||| |||
Sbjct 37063 TCTTTGAGAAGCGTGTCGGCGACTACCAGAAGGCCGGTGTCATG 37106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057811747753520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |