Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq226 165 1e-35
seq257 82.4 9e-11
>seq226
Length=19278
Score = 165 bits (182), Expect = 1e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 145646 TGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705
|||||||||| ||||| | |||||||||| ||||| || ||||||| | ||
Sbjct 16522 TGGGAAAGGGGCGGGGCGCGCGCGTCAGCTGGACGCGCAGGGCGTCGACGTGGTCGGCGT 16581
Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765
||||||| ||||| || ||||||||| | | ||||| ||||||| || | |||
Sbjct 16582 AGACGTGGGCGTCGCCGAGGACGTGGGTCAGCGAGCCGGGGACGAGGCCGCAGACGCGGG 16641
Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825
||| ||||| ||| ||||||| ||||||||| |||||||||||||| || || |||||||
Sbjct 16642 CGAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCATGT 16701
Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAG 145851
| | ||||||||||| |||||||||
Sbjct 16702 CGCAGGAGCGCTGGTAGAGCTGGCAG 16727
Score = 123 bits (136), Expect = 3e-23
Identities = 289/422 (68%), Gaps = 32/422 (8%)
Strand=Plus/Plus
Query 145860 CCCGCCCG--CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGG 145916
|||||||| ||||||| ||||| ||| | | |||||| |||||||| ||||
Sbjct 16860 CCCGCCCGTCCCACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGCACCATCAGCCC 16918
Query 145917 CAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCC-----TCCTGCT-CTCGGGGTTCCT 145970
|||||| |||||||||||||| || |||| | || ||| | ||| | |
Sbjct 16919 CAGGTCGCGCGGGTTCCAGGCGGACAGCACGATGCGGCGGTCGTGCGGCGCGGTGCGCAG 16978
Query 145971 CTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030
|||| | | | || | || |||||||| ||||||| || ||| || | |
Sbjct 16979 CTTGCGCACGACC-TCGG---CC--AGCTGGTCGACGCCCTCGCCGGTGTAGTCGGCGTC 17032
Query 146031 GGAGTCCACG-TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089
|| | || || |||||||| || ||||| | ||||||||| ||||||||||| || ||||
Sbjct 17033 GG-GCCCGCGGTACGCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGT 17091
Query 146090 CCCCGGGCTCCCTGT-GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCG 146148
| || | | || | | ||||| | ||| |||||||| | || ||||||||| ||
Sbjct 17092 CGCCCTCGGCGCGGTCGGCAAAGCCCTG-GCGGTCGAGGAAGGCGCGCGACCCGTTGCCG 17150
Query 146149 TCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC------CCCCTG 146202
|||||||| | ||||| | ||| ||||| ||| ||| ||| || | |
Sbjct 17151 TCCCAGATGTGCACGCCGCGCGC-----GCTCA-GCGAGGCCGACGACGTCTCGCCGCGG 17204
Query 146203 ATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGG 146262
|||||||| |||||||| || || || | | ||||||| | ||| || ||||||||
Sbjct 17205 ATGAACCACAGCAGCTCCTCCAGCACGGCGCGGAAGAAGACGCGCTTCGTCGTCAGCAGC 17264
Query 146263 GG 146264
||
Sbjct 17265 GG 17266
>seq257
Length=16631
Score = 82.4 bits (90), Expect = 9e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 36801 CGGGTTCTACAACACCCCGGTGCTGGTGGTGGACTTTGCCAGCCTGTACCCCACCATCAT 36860
|| |||||||| || ||||||| ||||| |||||||| ||||||||||||| | | | ||
Sbjct 15617 CGCGTTCTACAGCAGCCCGGTGGTGGTGCTGGACTTTACCAGCCTGTACCCGAGCCTGAT 15676
Query 36861 CCAGGCCCACAACCTCTGCTACTCCACC 36888
|| |||||||||||||||| |||
Sbjct 15677 GATCGCGTACAACCTCTGCTACTCGACC 15704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590070132132160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |