Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq376 118 1e-21
>seq376
Length=8930
Score = 118 bits (130), Expect = 1e-21
Identities = 296/446 (66%), Gaps = 8/446 (2%)
Strand=Plus/Plus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
||||||||||| || | | | ||| || || || |||| || ||||||| || |
Sbjct 6261 TCGAACTCGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTC 6320
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|| || |||| | || ||| || ||||| || || || || ||||| || || | ||
Sbjct 6321 CAGTCGCCGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAAC 6380
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| || | || | ||||| || || ||||| || ||||||||| | |
Sbjct 6381 AGGTCGCGGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAAC 6440
Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTC 66219
| ||| ||||||||| |||| ||| ||| || || | || ||||| |||||||| |
Sbjct 6441 ACGTCAGCATGCCACGGCTCCAGGTAGATG--CAGAAGGCGCCTGGCCGCTTGTTTCCAC 6498
Query 66220 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 66279
|||| || | || | || ||||| || | || | || ||| || | ||| || ||||
Sbjct 6499 CCTGGTCCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGG 6558
Query 66280 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAG 66337
||||||| ||||| |||| || || ||| | || || || | || ||
Sbjct 6559 ATGTACCGTTGGTGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCAT-- 6616
Query 66338 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 66397
|| || || || ||| | || ||||| | ||||| || | || || ||||||||
Sbjct 6617 CCCGATGCCACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCGTAGATGCC 6676
Query 66398 CTCTATACTATCATCCATCATGTTAA 66423
||| || || |||||| |||||| ||
Sbjct 6677 CTCAATGCTGTCATCCTTCATGTCAA 6702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658165362647360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |