Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq226 104 2e-17
seq407 89.7 4e-13
>seq226
Length=19278
Score = 104 bits (114), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948
||||| || || || | | | |||||| | |||||| || ||||||| | |||
Sbjct 16524 GGAAAGGGGCGGGGCGCGCGCGTCAGCTGGACGCGCAGGGCGTCGACGTGGTCGGCGTAG 16583
Query 20949 ACGTGGGCGTCACCCAAGGTGTG---CACAAAGTCTCCCGGGGTC-AGGCCCGTGACGTG 21004
||||||||||| || | | ||| || || |||||| | ||||| |||| |
Sbjct 16584 ACGTGGGCGTCGCCGAGGACGTGGGTCAGCGAG----CCGGGGACGAGGCCGCAGACGCG 16639
Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064
|||| || | || || |||||||||||||| ||||| || || || |||||||||||
Sbjct 16640 GGCGAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCAT 16699
Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAG 21092
|||| ||| | |||||| |||||||||
Sbjct 16700 GTCGCAGGAGCGCTGGTAGAGCTGGCAG 16727
>seq407
Length=7586
Score = 89.7 bits (98), Expect = 4e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 15825 GGGCGCGACGGTGATCAACCCCATTCCGGGGTTTTACGACGAGCCGGTCCTGGTGGTCGA 15884
||| |||||||||||| | || | | | |||| ||| | |||||||| | | | ||
Sbjct 1685 GGGGGCGACGGTGATCGAGCCGGTGCGGCGGTTCTACAAGGAGCCGGTGGCGACGCTGGA 1744
Query 15885 TTTTGCCAGCCTGTACCCGAGCATCATCCAGGCGCACAACCTGTGCTAC 15933
||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1745 CTTTGCGTCGCTGTACCCGAGCATCATGCAGGCGCACAACCTGTGCTAC 1793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427771286977920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |