Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq896 91.5 1e-13 >seq896 Length=67886 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33575 AGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 |||| |||||||||||||| ||| ||||| | ||||||| ||| || ||| |||| Sbjct 56452 AGATTGGCGACAAGTTTGCGTCGCGGCACGGAC-AGAAGGGTACGATTGGTGTGACGTAC 56394 Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693 | |||||||||||||||| | || ||| | |||||| | ||||||||||| Sbjct 56393 CGGTCGGAGGACATGCCGTTCACGACGGAGGGCATCACGCCGGACATCATCATCAACCCG 56334 Query 33694 CATGCGTTCCCCTCGCGCATGACG 33717 || || |||| |||||||||||| Sbjct 56333 CACGCCATCCCGTCGCGCATGACG 56310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356229675196312