Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq34 132 4e-26
>seq34
Length=160120
Score = 132 bits (146), Expect = 4e-26
Identities = 198/279 (71%), Gaps = 4/279 (1%)
Strand=Plus/Plus
Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640
||||||| | ||||| || || |||||||| | | || | || ||| || |||
Sbjct 15477 GCGCTCGAGCACGAGCTGGGCGATGCGGTCGCCGGGCGCGACGGCAAAGTCGGCGTCGCC 15536
Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700
| ||||||||||| |||| |||| |||||||||||||||||| || ||||| |||||
Sbjct 15537 GTGGTTGAACAGCAGGACGCGGACGTGGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCC 15596
Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCC 5760
|| |||| ||||||||| || ||||||||||| || || ||||||||||| ||
Sbjct 15597 GGTGTTGATGGCGTGCTTGACGGCGAGGCCGGAGCGCGGCGCGACGCGGCCGTACGTGCC 15656
Query 5761 ATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCGACCGCCCGCAGGGACGAT 5820
|||| | || |||||| ||| || | || |||| ||| |||| |
Sbjct 15657 GGCGGGCACGGCCATGGCCAGGTCGGTGTCGACGAGGGCGCGGCCGCGCGCGGGGATCGT 15716
Query 5821 GCAGTCGCAAGCGCTGC--AGAGGTCGTACCCGGCCGCC 5857
| ||||| |||| || | |||||||| |||||||||
Sbjct 15717 G--GTCGCGCGCGCGGCGTACAGGTCGTAGCCGGCCGCC 15753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430049661875648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |