Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq34 132 4e-26 >seq34 Length=160120 Score = 132 bits (146), Expect = 4e-26 Identities = 198/279 (71%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| | ||||| || || |||||||| | | || | || ||| || ||| Sbjct 15477 GCGCTCGAGCACGAGCTGGGCGATGCGGTCGCCGGGCGCGACGGCAAAGTCGGCGTCGCC 15536 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | ||||||||||| |||| |||| |||||||||||||||||| || ||||| ||||| Sbjct 15537 GTGGTTGAACAGCAGGACGCGGACGTGGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCC 15596 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCC 5760 || |||| ||||||||| || ||||||||||| || || ||||||||||| || Sbjct 15597 GGTGTTGATGGCGTGCTTGACGGCGAGGCCGGAGCGCGGCGCGACGCGGCCGTACGTGCC 15656 Query 5761 ATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCGACCGCCCGCAGGGACGAT 5820 |||| | || |||||| ||| || | || |||| ||| |||| | Sbjct 15657 GGCGGGCACGGCCATGGCCAGGTCGGTGTCGACGAGGGCGCGGCCGCGCGCGGGGATCGT 15716 Query 5821 GCAGTCGCAAGCGCTGC--AGAGGTCGTACCCGGCCGCC 5857 | ||||| |||| || | |||||||| ||||||||| Sbjct 15717 G--GTCGCGCGCGCGGCGTACAGGTCGTAGCCGGCCGCC 15753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430049661875648