Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq34 82.4 5e-11 >seq34 Length=160120 Score = 82.4 bits (90), Expect = 5e-11 Identities = 182/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 74967 GCCGCGGGTTACGACCTGGCGGCCGCTCACCCGGTCGTGGTCCCCTCCTTTGGCAGGGCC 75026 || || || ||||||||| ||||| | | || | | ||||| | ||| | ||| Sbjct 15752 GCGGCCGGCTACGACCTGTACGCCGCGCGCGCGACCACGATCCCCGCGCGCGGCCGCGCC 15693 Query 75027 CTGGTAAAGACAGACCTGGCCGTTAAGATGCCCCCGGGCCTCTACGGCAGGGTGGCTCCC 75086 || || | || ||||||||| | ||||| | ||| |||||| | || || || Sbjct 15692 CTCGTCGACACCGACCTGGCCATGGCCGTGCCCGCCGGCACGTACGGCCGCGTCGCGCCG 15633 Query 75087 AGGTCCGGCCTGGCCCTGAAAAAATTTATAGACGTCGGTGCCGGGGTGGTGGACCCCGAC 75146 | |||||||| ||| | || | || || ||| ||||| || | ||| ||||| Sbjct 15632 CGCTCCGGCCTCGCCGTCAAGCACGCCATCAACACCGGCGCCGGCGTCATCGACGCCGAC 15573 Query 75147 TACAGGGGCAACCTCGGCGTCATACTGTTTAACTTTGGGTGCGACCCCTTTCGGGTCAAG 75206 ||| | ||| || || ||||| | ||||| ||| || || | |||| ||| | Sbjct 15572 TACCGCGGCCACGTCCGCGTCCTGCTGTTCAACCACGGCGACGCCGACTTTGCCGTCGCG 15513 Query 75207 AGGGGCGACAGGATAGCCCAGCTCGTGCTCGAG 75239 |||||| | || |||||||||||||||||| Sbjct 15512 CCCGGCGACCGCATCGCCCAGCTCGTGCTCGAG 15480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338761067658816