Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_006151.1
Length=143461
Score E
Sequences producing significant alignments: (Bits) Value
seq898 96.9 3e-15
seq407 95.1 1e-14
>seq898
Length=67485
Score = 96.9 bits (106), Expect = 3e-15
Identities = 235/350 (67%), Gaps = 36/350 (10%)
Strand=Plus/Minus
Query 94150 GAGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCGC---CGCACGGTCAG 94206
|| |||| |||||||| | |||||| ||| || || || || ||||| |||||
Sbjct 59640 GAACCGCTCCCAGCCGTGGTTGGCGTGCGAGTTGG---CCTCGTGCGCGCGCACCGTCAG 59584
Query 94207 CGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCC-TC--CAGGCAGCCGTGGGC 94263
|||||| ||||||||||| ||||| ||||| ||| || ||||| |||| ||
Sbjct 59583 GCACGTGTTGAGCAGCAGCACGCCGCGCTCGGCCCACGCCGTCAGCAGGCCGCCGCCCGC 59524
Query 94264 GG------GCGCGGGCAGCGTCGGGTACGTCGCCCGGAC-------CGCCG-----CGAA 94305
| ||| ||| ||| | || |||||||| || ||| | || |
Sbjct 59523 GCCGTTCTGCGTCGGCGGCGCCCGGAACGTCGCCGGGTAGTCGTTGCGCAGGCCCACGTA 59464
Query 94306 GATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGG----ACGCTGAAGGCCAGCC 94361
| |||| ||| ||| || ||||| | | || ||| || ||| |||||||
Sbjct 59463 CACGTTGCGCAGCGACGGCGG---CGGCAGCAC-CGGCGGCTTCACCGAGAACGCCAGCC 59408
Query 94362 CGTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCT 94421
|||| ||||| || | |||||||||||||||||| | ||| ||||||||||| || |
Sbjct 59407 CGTGTGCCTGCCCGTGGTTGTGGTACGGGTCCTGGCCCACGATCACCACCTTGACCTCGT 59348
Query 94422 CGGGCGCCGTGAGGCGCGTCCAGGCGAACACGTCCTCGCGC-GCGGGCAG 94470
|| |||| |||| ||| | | ||||||||||| || ||||| ||
Sbjct 59347 GCACCGGCGTGTACCGCGACCACGAGTACACGTCCTCGGGCGGCGGGAAG 59298
>seq407
Length=7586
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 27264 GGGCGCCAAGGTGCTCGAGCCCGACTCGGGCTTCCACGTGGACCCGGTGCTCGTGCTGGA 27323
||| || | |||| ||||||| | | | ||| || ||| |||||| ||||||
Sbjct 1685 GGGGGCGACGGTGATCGAGCCGGTGCGGCGGTTCTACAAGGAGCCGGTGGCGACGCTGGA 1744
Query 27324 CTTTGCCAGCCTGTACCCGAGCATCATCCAGGCGCACAACCTGTGCTTCACGACGCT 27380
|||||| ||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1745 CTTTGCGTCGCTGTACCCGAGCATCATGCAGGCGCACAACCTGTGCTACACGACGCT 1801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458942013896640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |