Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=398088 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||||| ||||| || ||||| || || |||||||| | || || ||||| | Sbjct 37091 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 37032 Query 119702 CATAAACTCGAAAGGATTTGCA-GTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACA 119760 ||| || || ||||| |||| | | | | |||||||| ||| | | || || Sbjct 37031 CATGAAGTC-AAAGGGGTTGCTCGAGCGGTACACCTTGTCGTTGCCGAGAGAAACCAGCA 36973 Query 119761 GTCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAG 119820 | ||||| ||||||||||| ||||| | |||| ||| |||||||||| || | Sbjct 36972 GGCGATCGGCCACAAACTCAATGTACTGCTTCATGAGCGTCGAGTTCATGCCCAGCAGGG 36913 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTAC 119872 || || | ||| | ||| | ||| |||| || || | ||| || || || Sbjct 36912 CGCAGGGCAGAGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCATCGAC 36861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656991114880