Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq376 248 8e-61
seq233 141 9e-29
seq23 134 1e-26
seq1 111 1e-19
seq204 105 6e-18
>seq376
Length=8930
Score = 248 bits (274), Expect = 8e-61
Identities = 940/1445 (65%), Gaps = 45/1445 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| |||||||| |||| |||||| ||| || | ||| |||||| | ||
Sbjct 5448 TTGACCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGC 5507
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | ||||| ||||||||||| || | ||||| ||| || ||||| |||||||
Sbjct 5508 TCGAAGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACC 5567
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
|| | ||||||| |||||||| |||||| | |||| |||| |||||
Sbjct 5568 AACAGACTGTTGCGCACGCCGTGCTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCCAC 5627
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296
|| |||||| | ||||||||||| || |||||| ||||||| || || |
Sbjct 5628 AGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAGAC 5687
Query 145297 GCCTTGAAAG--GAACTGTA-ACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAG 145353
||| | | | || ||| || || | || || || || ||||| |||| |||
Sbjct 5688 CCCTCGTACGTCGA---GTACACGCCCTCCAG-CTTCGCCAGGTCGCATGACGCCGTCAG 5743
Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413
|| || || || ||||| || ||| |||||||| ||| || |||
Sbjct 5744 CGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCGACTC 5803
Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473
| ||||| |||||| | || ||||| || | ||||| | ||||| ||||| ||
Sbjct 5804 AAAAGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGG 5863
Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAA 145532
||| || ||||||||| | | |||| | | ||| || | | | || |||||| |
Sbjct 5864 CCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGAC-GTCGATGA 5922
Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592
| |||| ||| ||||| || |||| || | | | | ||| | ||||| ||
Sbjct 5923 TACGGTTCAGGTTGCGCACCACCACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTAC- 5981
Query 145593 GAGCCTCGTCAACG-ACCACACAGCTATTGACG-----GCGATCGACGCCAAATTACAAA 145646
| ||||| || | |||| | |||| || | ||||| || || || |
Sbjct 5982 --GTCTCGTTGGCGTAGTCCACA---AAAGACGGCAGCGCCAGCGACGACAGGTTGCACA 6036
Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706
| ||| ||| |||| ||| ||| | | ||||| | ||||| ||| | ||
Sbjct 6037 CCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAGCTGCGGA 6096
Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766
|||| ||||| || | ||| || || || | |||||| ||||||||| |||||| |||
Sbjct 6097 TGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACG 6156
Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACC- 145825
| ||| |||||| ||||| ||||| || | || | ||| || |||
Sbjct 6157 GGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCCTTGACCG 6216
Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885
||| | || |||||||| | ||||| ||| ||| | |||| ||| || |||
Sbjct 6217 TGC-GACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACTCGTCGCCG 6275
Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945
||||| |||| ||| || || |||| ||||| |||||||||| ||| |||||||
Sbjct 6276 TAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGCCGTTCTTC 6335
Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTT 146003
| || |||| ||| |||| || || | ||| ||||| | || ||||| |||| |
Sbjct 6336 TCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCGGGCGCGT 6395
Query 146004 TGCAATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGT 146060
| ||||| ||||| ||| || || | || | ||| | | ||| || |
Sbjct 6396 ACC--TCCTC-CTTGCCATGGTTCTTGC-GCAGGTCGAGGA-ACTCGAACACGTCAGCAT 6450
Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGT 146117
||||||| || | |||| | || ||| ||| || ||| |||||||||||||| |
Sbjct 6451 GCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGGTCCACAT 6510
Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177
|| || ||||||| || ||||||| ||| || | | |||| ||| | ||||| |
Sbjct 6511 AGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTACCGTTGG 6570
Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGA-GACCGCCG 146236
| | || | ||| || ||| | || || || |||| |||| | | |||
Sbjct 6571 TGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCATCCCGATGCCACCCG 6630
Query 146237 CCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295
|||| |||||| || |||| |||| ||| || ||||||||||| |||||||| ||
Sbjct 6631 CCGT-CTTGGAGATCATAGCGCAAGTC-TTGAGGGTGTCGTAGATGCCCTCAATGCTGTC 6688
Query 146296 --GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353
|||| ||| | | ||| |||||||| | ||| || ||||| || || |
Sbjct 6689 ATCCTTC--ATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAGCGTTG 6746
Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATA 146413
|| | ||| || |||||| || || | || | ||| ||||| || |
Sbjct 6747 AAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTACGTCTCCAGG 6806
Query 146414 GCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGC 146473
|| | | || |||||| || || | || |||||||||| |||||| ||||||
Sbjct 6807 ACGCGCTCCACGTTGTCGCCCCAGATCCCGACCGCCACGCGCATGATCATGTGCTGGGGC 6866
Query 146474 CGCTC 146478
|||||
Sbjct 6867 CGCTC 6871
>seq233
Length=18884
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| ||| ||||| | || | ||||||||||| ||||||||||| |||||
Sbjct 1804 GCCACCGCGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCT 1863
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| |||||| ||||||||||| || |||| | |||||||||||||| ||
Sbjct 1864 CAGGGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGCGG 1923
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || || || || ||| ||||| | || | || || | ||||| |
Sbjct 1924 GATGCCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCAC 1983
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || ||||| || || || ||||| || |||||
Sbjct 1984 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 2031
Score = 125 bits (138), Expect = 7e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||||| || ||||| | || | ||||||||||| || |||||||| ||||||
Sbjct 2033 CCGCCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2092
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| || |||| | |||||||||||||| |||
Sbjct 2093 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 2152
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | || || | ||||| |
Sbjct 2153 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACC 2212
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || ||||| || || || ||||| || |||||||
Sbjct 2213 TCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCATGA 2261
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| ||| ||||| | || | || |||||| ||||||||||| |||
Sbjct 1576 GCCACCGCGCAGACGGAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGA 1635
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || ||| ||||| ||||||||||| ||| | || | |||||||||||||| ||
Sbjct 1636 CAGCGTCCGCCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGCGG 1695
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| ||| ||||| | || | || ||| || ||| |
Sbjct 1696 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGCTGCTCTCCAC 1755
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| |||| || || || || || || || || || |||||||||
Sbjct 1756 CTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATG 1804
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||||| | || | || |||||| || |||||||| || |
Sbjct 1349 CCACCCCGCAGCCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 1408
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || ||| |||||| ||||||||||| || |||| | |||||||||||||| |||
Sbjct 1409 AGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGCCGCTGCTGGTCCGGCGGG 1468
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | || ||| || ||| |
Sbjct 1469 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCGCTGCTCTCCACC 1528
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| |||| || || || || || || || ||||| |||||||||
Sbjct 1529 TCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 1576
>seq23
Length=165582
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||||||||| | || | ||||||||||| || |||||||| ||| |
Sbjct 62221 CCACCGCGCAGACGCAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 62162
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| |||||||||||||| |||| | |||||||||||||| |||
Sbjct 62161 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 62102
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 62101 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 62042
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226
|| | || | ||| || || || || || || ||||||
Sbjct 62041 TCCAAAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 62003
>seq1
Length=398088
Score = 111 bits (122), Expect = 1e-19
Identities = 338/513 (66%), Gaps = 11/513 (2%)
Strand=Plus/Plus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|| ||| | |||||||| |||||||||| | |||||| | || | ||
Sbjct 36582 CCTTGCATCCGCAAGAAGGCCGACTGGGCCCTTCGCTGGATCTCCGACAAGGAGTCTACC 36641
Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206
|| || ||||| |||| || || || || |||||| |||| || ||| |||
Sbjct 36642 TTTGCGCAGCGTCTGGTCGCATTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCTTTC 36701
Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266
| ||||||| | | || | ||| | |||||||||||||| || |||||||
Sbjct 36702 TCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAG 36761
Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTCG 46325
||||| ||||| |||||||||||||| || ||||| || || || || | | || ||
Sbjct 36762 CTGATCTCGCGTGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTCTCCCA-TC- 36819
Query 46326 CGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCC 46383
|| | || || || || | | |||| ||| || || || ||
Sbjct 36820 --TG-AAGAACCGCCCCAGCAAGA-AGGTTATTGAGGACATCATCGTCGATGCCGTCAAG 36875
Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC-ACA 46442
|| ||| ||||||| | || | || |||||| |||||||||||||||||| | ||
Sbjct 36876 ATCGAGCAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACTCGACG 36935
Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCC 46502
|| ||| | ||||| |||||||| || || || ||||| || || | |
Sbjct 36936 CTC-ATGAAGCAGTACATTGAGTTTGTGGCCGATCGCCTGCTGGTTTCTCTCGGCAACGA 36994
Query 46503 GAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562
||| | | | || |||| || ||||| || ||| | ||||||||||||| |||||
Sbjct 36995 CAAGGTGTACCGCTCGAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAA 37054
Query 46563 AACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || || ||||| |||||||| ||
Sbjct 37055 GACCAACTTCTTTGAGAAGCGTGTCGGCGACTA 37087
>seq204
Length=21219
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || |||| |||||||| | || | || |||||| || |||||||| |||
Sbjct 5912 GCCGCCACGCAGGCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGA 5853
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 5852 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 5793
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || || | | ||| |
Sbjct 5792 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGCTCTCCAC 5733
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 5732 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 5685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472007466255360
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