Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq376 248 8e-61 seq233 141 9e-29 seq23 134 1e-26 seq1 111 1e-19 seq204 105 6e-18 >seq376 Length=8930 Score = 248 bits (274), Expect = 8e-61 Identities = 940/1445 (65%), Gaps = 45/1445 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| |||||||| |||| |||||| ||| || | ||| |||||| | || Sbjct 5448 TTGACCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGC 5507 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| ||||||||||| || | ||||| ||| || ||||| ||||||| Sbjct 5508 TCGAAGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACC 5567 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | ||||||| |||||||| |||||| | |||| |||| ||||| Sbjct 5568 AACAGACTGTTGCGCACGCCGTGCTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCCAC 5627 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || |||||| | ||||||||||| || |||||| ||||||| || || | Sbjct 5628 AGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAGAC 5687 Query 145297 GCCTTGAAAG--GAACTGTA-ACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAG 145353 ||| | | | || ||| || || | || || || || ||||| |||| ||| Sbjct 5688 CCCTCGTACGTCGA---GTACACGCCCTCCAG-CTTCGCCAGGTCGCATGACGCCGTCAG 5743 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 || || || || ||||| || ||| |||||||| ||| || ||| Sbjct 5744 CGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCGACTC 5803 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | ||||| |||||| | || ||||| || | ||||| | ||||| ||||| || Sbjct 5804 AAAAGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGG 5863 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGATAA 145532 ||| || ||||||||| | | |||| | | ||| || | | | || |||||| | Sbjct 5864 CCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGAC-GTCGATGA 5922 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592 | |||| ||| ||||| || |||| || | | | | ||| | ||||| || Sbjct 5923 TACGGTTCAGGTTGCGCACCACCACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTAC- 5981 Query 145593 GAGCCTCGTCAACG-ACCACACAGCTATTGACG-----GCGATCGACGCCAAATTACAAA 145646 | ||||| || | |||| | |||| || | ||||| || || || | Sbjct 5982 --GTCTCGTTGGCGTAGTCCACA---AAAGACGGCAGCGCCAGCGACGACAGGTTGCACA 6036 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | ||| ||| |||| ||| ||| | | ||||| | ||||| ||| | || Sbjct 6037 CCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAGCTGCGGA 6096 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 |||| ||||| || | ||| || || || | |||||| ||||||||| |||||| ||| Sbjct 6097 TGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACG 6156 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACC- 145825 | ||| |||||| ||||| ||||| || | || | ||| || ||| Sbjct 6157 GGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCCTTGACCG 6216 Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 ||| | || |||||||| | ||||| ||| ||| | |||| ||| || ||| Sbjct 6217 TGC-GACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACTCGTCGCCG 6275 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 ||||| |||| ||| || || |||| ||||| |||||||||| ||| ||||||| Sbjct 6276 TAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGCCGTTCTTC 6335 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTT 146003 | || |||| ||| |||| || || | ||| ||||| | || ||||| |||| | Sbjct 6336 TCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCGGGCGCGT 6395 Query 146004 TGCAATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGT 146060 | ||||| ||||| ||| || || | || | ||| | | ||| || | Sbjct 6396 ACC--TCCTC-CTTGCCATGGTTCTTGC-GCAGGTCGAGGA-ACTCGAACACGTCAGCAT 6450 Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGT 146117 ||||||| || | |||| | || ||| ||| || ||| |||||||||||||| | Sbjct 6451 GCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGGTCCACAT 6510 Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177 || || ||||||| || ||||||| ||| || | | |||| ||| | ||||| | Sbjct 6511 AGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTACCGTTGG 6570 Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGA-GACCGCCG 146236 | | || | ||| || ||| | || || || |||| |||| | | ||| Sbjct 6571 TGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCATCCCGATGCCACCCG 6630 Query 146237 CCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 |||| |||||| || |||| |||| ||| || ||||||||||| |||||||| || Sbjct 6631 CCGT-CTTGGAGATCATAGCGCAAGTC-TTGAGGGTGTCGTAGATGCCCTCAATGCTGTC 6688 Query 146296 --GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353 |||| ||| | | ||| |||||||| | ||| || ||||| || || | Sbjct 6689 ATCCTTC--ATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAGCGTTG 6746 Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATA 146413 || | ||| || |||||| || || | || | ||| ||||| || | Sbjct 6747 AAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTACGTCTCCAGG 6806 Query 146414 GCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGC 146473 || | | || |||||| || || | || |||||||||| |||||| |||||| Sbjct 6807 ACGCGCTCCACGTTGTCGCCCCAGATCCCGACCGCCACGCGCATGATCATGTGCTGGGGC 6866 Query 146474 CGCTC 146478 ||||| Sbjct 6867 CGCTC 6871 >seq233 Length=18884 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| ||| ||||| | || | ||||||||||| ||||||||||| ||||| Sbjct 1804 GCCACCGCGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCT 1863 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| |||||| ||||||||||| || |||| | |||||||||||||| || Sbjct 1864 CAGGGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGCGG 1923 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || ||| ||||| | || | || || | ||||| | Sbjct 1924 GATGCCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCAC 1983 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| || || || ||||| || ||||| Sbjct 1984 CTCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 2031 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||||| || ||||| | || | ||||||||||| || |||||||| |||||| Sbjct 2033 CCGCCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2092 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | |||||||||||||| ||| Sbjct 2093 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 2152 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || || | ||||| | Sbjct 2153 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACC 2212 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || ||||| || || || ||||| || ||||||| Sbjct 2213 TCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCATGA 2261 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| ||| ||||| | || | || |||||| ||||||||||| ||| Sbjct 1576 GCCACCGCGCAGACGGAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGA 1635 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || ||| ||||| ||||||||||| ||| | || | |||||||||||||| || Sbjct 1636 CAGCGTCCGCCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGCGG 1695 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | || ||| || ||| | Sbjct 1696 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGCTGCTCTCCAC 1755 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| || || || || || || || || || ||||||||| Sbjct 1756 CTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATG 1804 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | || |||||| || |||||||| || | Sbjct 1349 CCACCCCGCAGCCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 1408 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| |||||| ||||||||||| || |||| | |||||||||||||| ||| Sbjct 1409 AGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGCCGCTGCTGGTCCGGCGGG 1468 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || ||| || ||| | Sbjct 1469 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCGCTGCTCTCCACC 1528 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| || || || || || || || ||||| ||||||||| Sbjct 1529 TCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 1576 >seq23 Length=165582 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||||||||| | || | ||||||||||| || |||||||| ||| | Sbjct 62221 CCACCGCGCAGACGCAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 62162 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||||||||| |||| | |||||||||||||| ||| Sbjct 62161 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 62102 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 62101 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 62042 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 || | || | ||| || || || || || || |||||| Sbjct 62041 TCCAAAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 62003 >seq1 Length=398088 Score = 111 bits (122), Expect = 1e-19 Identities = 338/513 (66%), Gaps = 11/513 (2%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | |||||||| |||||||||| | |||||| | || | || Sbjct 36582 CCTTGCATCCGCAAGAAGGCCGACTGGGCCCTTCGCTGGATCTCCGACAAGGAGTCTACC 36641 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || || ||||| |||| || || || || |||||| |||| || ||| ||| Sbjct 36642 TTTGCGCAGCGTCTGGTCGCATTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCTTTC 36701 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 | ||||||| | | || | ||| | |||||||||||||| || ||||||| Sbjct 36702 TCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAG 36761 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACTCG 46325 ||||| ||||| |||||||||||||| || ||||| || || || || | | || || Sbjct 36762 CTGATCTCGCGTGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTCTCCCA-TC- 36819 Query 46326 CGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCC 46383 || | || || || || | | |||| ||| || || || || Sbjct 36820 --TG-AAGAACCGCCCCAGCAAGA-AGGTTATTGAGGACATCATCGTCGATGCCGTCAAG 36875 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC-ACA 46442 || ||| ||||||| | || | || |||||| |||||||||||||||||| | || Sbjct 36876 ATCGAGCAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACTCGACG 36935 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCC 46502 || ||| | ||||| |||||||| || || || ||||| || || | | Sbjct 36936 CTC-ATGAAGCAGTACATTGAGTTTGTGGCCGATCGCCTGCTGGTTTCTCTCGGCAACGA 36994 Query 46503 GAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562 ||| | | | || |||| || ||||| || ||| | ||||||||||||| ||||| Sbjct 36995 CAAGGTGTACCGCTCGAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGCAA 37054 Query 46563 AACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || || ||||| |||||||| || Sbjct 37055 GACCAACTTCTTTGAGAAGCGTGTCGGCGACTA 37087 >seq204 Length=21219 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||||| | || | || |||||| || |||||||| ||| Sbjct 5912 GCCGCCACGCAGGCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGA 5853 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 5852 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 5793 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || || | | ||| | Sbjct 5792 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGCTCTCCAC 5733 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 5732 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 5685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007466255360