Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq376 131 2e-25 >seq376 Length=8930 Score = 131 bits (144), Expect = 2e-25 Identities = 299/446 (67%), Gaps = 8/446 (2%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | | | |||| || || || |||| || ||||||| || | Sbjct 6261 TCGAACTCGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTC 6320 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| | || ||| || ||||| || || || || ||||| || || | || Sbjct 6321 CAGTCGCCGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAAC 6380 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | || | ||||| || || ||||| || ||||||||| | | Sbjct 6381 AGGTCGCGGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAAC 6440 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTC 63230 | |||| ||||||||| |||| ||| ||| || || | || ||||| |||||||| | Sbjct 6441 ACGTCAGCATGCCACGGCTCCAGGTAGATG--CAGAAGGCGCCTGGCCGCTTGTTTCCAC 6498 Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290 |||| || | || | || ||||| || | || | || ||| || | ||| || |||| Sbjct 6499 CCTGGTCCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGG 6558 Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAG 63348 ||||||| ||||| || | || || ||| |||| || || | || || Sbjct 6559 ATGTACCGTTGGTGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCAT-- 6616 Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408 || || || || ||| | || ||||| | ||||| || | || || |||||||| Sbjct 6617 CCCGATGCCACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCGTAGATGCC 6676 Query 63409 CTCTATACTATCATCCATCATGTTAA 63434 ||| || || |||||| |||||| || Sbjct 6677 CTCAATGCTGTCATCCTTCATGTCAA 6702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624839958400