Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 2e-11
>seq1
Length=398088
Score = 84.2 bits (92), Expect = 2e-11
Identities = 191/287 (67%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|||||||| ||||| | |||||| || | ||||| |||| |||||||| || |||
Sbjct 36476 ATGTATGTGTCGATGAGCAGAGAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGG 36417
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| ||||||||||| | || || | | ||| || || || | ||| || ||
Sbjct 36416 AAGCCGTAGAAACAACGGGCCTCGGGAACCTGGACCTCGCCGCTGAAGCGCTCGACCAGG 36357
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| || ||||| || ||||| || || || || || || | || || ||| ||
Sbjct 36356 TTCTCGTTGACAATGCCATCCGACGCGGCGAAGAAGGCAAGGATGTGGGATATGAAGAAC 36297
Query 93542 TTCTCATCATCTTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598
||| ||||| | | | || | ||| ||| | || || || ||||||| ||
Sbjct 36296 CGCTCGTCATCGGTCAGGCGGTTGTTCCAGTCGTGCATGTCCTTGGACAGATCGATCTCC 36237
Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
|| | ||||| ||||| || || || || |||||||| | ||| ||
Sbjct 36236 TCAGCCGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCTGCCAGAT 36190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556854507472960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |