Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq197 178 2e-39
seq204 170 4e-37
seq233 159 6e-34
seq1 134 3e-26
seq600 107 4e-18
>seq197
Length=21987
Score = 178 bits (196), Expect = 2e-39
Identities = 712/1092 (65%), Gaps = 72/1092 (7%)
Strand=Plus/Plus
Query 224942 GCGCGATCAACCGACTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTG 225001
|| || || | || ||| |||||| ||| | | | ||||||||||||||||
Sbjct 6233 GCCCGGTCCATCGTCTCGCGGTCCTCGCCCGTGCGGAAACGCCACTGGATGTACTCCGAC 6292
Query 225002 GGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATG 225061
|| ||| ||||||||||||| ||||| || || || ||||| | |||||| ||
Sbjct 6293 GGCGTCTTGTCCAGGTGGTTGTCAATGTGCGCAAACGCGTGCTGCTTGATGTACGCAATC 6352
Query 225062 CGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACC 225121
|||||||| |||| |||| ||| | ||||| |||||| || || ||
Sbjct 6353 CGCATGTTCTCGTGCTGGTACACCTCGCCGCTCGTCGGGATCAGCTCGCCCGTCAGCACG 6412
Query 225122 TTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACATT 225181
|||| ||||| | |||||||||||| |||||||||||||| | || || || ||
Sbjct 6413 TTGACCAGCGTCGACTTGCCCGCACCGTTGGGGCCAATCACCGCGATACGCGAGCTCAGC 6472
Query 225182 GCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG-----GCCAGTTTGG-TAAGCAAAG 225235
| ||| | ||||||| |||||| || || ||| || || |||
Sbjct 6473 GAGCACTGGAACGTCACGTTCG---AGATCTGCGGCTTCGGCGTGTTCGGGTACTGGAAG 6529
Query 225236 GCCACGCCA--CGCAGCTTCATGATGGCACGGTCCTTGGAAGTAATACCCTCCAGGAACC 225293
|| | ||| || || |||||| | |||||| | | ||||||||||| |
Sbjct 6530 CTCATGTTGGTCGC-GCG-CAGGATGGCCTTGGCCTTGGTCTTGACGCCCTCCAGGAAAC 6587
Query 225294 CGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTAGTAAGATGCAGC-C 225352
||||||||||||| ||| || ||| | ||| |||||||| | || |
Sbjct 6588 CGGGCTCGGGGAAGGTGAACTCCATCTCCGACGCGCCCAGCTCGTAGTACGCCTTGGCGC 6647
Query 225353 TCGG--GTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGT 225410
|||| | |||| | || || || |||||| || ||| | ||||||||| |
Sbjct 6648 TCGGCAGGCGCT---CGACAAACGCCTTCAGGTTGCCCCGGTAGCGCTTGAGCTTGAAGC 6704
Query 225411 TCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGAC 225469
|| |||| || | || ||| | |||||| ||| |||||||| || ||||| |||
Sbjct 6705 GCT---CGTAGTGGATGATGTGCTG-GCACACGTTGTCCAGGAAGCCCGAATCGTGCGAC 6760
Query 225470 ACAATGATGGACGA-CACGTTCGTCAGGCCCTTGA---GGTGCGTGATG-AGCCATGCCA 225524
|| ||||| |||| |||| || || |||| ||| || | ||||| |
Sbjct 6761 ACGATGATCGACGTGCACGG-CG--AG----TTGATCAGGTA-GTCCTCCAGCCACTTGA 6812
Query 225525 CGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGA 225584
|||| | ||||||| |||||| || || |||||||| ||||| ||||| | | ||
Sbjct 6813 CGTTCTTCACGTCCAAGTGGTTGGTCGGCTCGTCCAGCAGCAGAATGTCCGGCGCCTCGA 6872
Query 225585 GGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT-TGAA 225643
| ||| || || | ||||||||| |||||||| || ||||||| |||| ||
Sbjct 6873 ACACGGCACGGCACAGGGCCAGCTTCATCTTCCAGCCACCAGACAGGG--CCGAGATGTC 6930
Query 225644 ACAGAGTGCTTAGCT--TCGTCAAAGCCGTACTC---CAGGAGCGTCTGGATAATGCGCT 225698
| ||| | | || ||| |||||| |||| |||| || | ||| | | ||
Sbjct 6931 GCCC-GTGATCATCTGGTCGGAGAAGCCGAACTCGCCCAGGCGCTT---GATGACGTCCT 6986
Query 225699 CG--GGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGA--------GGT--AATCAT 225746
| ||||| || | || |||| |||| | || ||| | |||
Sbjct 6987 CCTTGGAGACCT--------CGACCTTGGCCTCGGCC-AGCTTCTTCATGGTCCAGTCAA 7037
Query 225747 ATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT 225806
|||||| |||| | | || ||| | |||||| || ||| |||| ||| || ||
Sbjct 7038 TCGTGGTCATCTCCGTGTCCTCCGAGTCCAGGTCGTGCTCGACGAACACGGTCTTGACCT 7097
Query 225807 -GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTC 225865
| || | |||||||||||| | ||| |||| || || || | ||| || |
Sbjct 7098 CGCTCTGCTT-GGGGAAGCCCTCGACCTGCTCATTGTTGATGGCGCGCATCAGCGTCGAC 7156
Query 225866 TTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGC 225925
||||||| |||||||||||| |||||||| | | |||||||| | ||| |
Sbjct 7157 TTGCCCGAACCGTTGGGACCGCACAGGCCGTAGCGCTGGCCGCGCTTCAGACGCAGGTGG 7216
Query 225926 GTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCC 225985
|| |||||| ||||||||| |||| || || || |||||| ||| | ||||||||||
Sbjct 7217 GTCTGGTTCAGCAGGATCTTGGCACCGTACGCGAGCGAGAACGTGCAGTTGCACAGGTCC 7276
Query 225986 TCACCCTCCTCG 225997
|| |||||||||
Sbjct 7277 TCGCCCTCCTCG 7288
Score = 100 bits (110), Expect = 5e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 224495 GAAAGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACG 224554
|| |||||||| ||||| |||||||| ||| ||||||||||||| ||||| | || | |
Sbjct 5741 GACAGCGCGCCCAGCGAGTCGCGGTCCAGGTAGTTCGTCGGCTCGTCCAGCACAATCAAG 5800
Query 224555 TGGGGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGG 224614
|| || | ||||||| | || | | ||||| ||| ||| ||| ||||| || ||
Sbjct 5801 TGCGGCCGCTGCCACGAGCACGCCGCCAGCACCACCTTGACCCGCTGCCCGCCCGACAGA 5860
Query 224615 CCGCGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGC 224664
|| || ||||||||||| | | | || | ||| || |||| |||||
Sbjct 5861 CCCCGCATCCGCGAGTGCGAGATCAGCTCCGCGTCCAGCCCAAAGTTGGC 5910
>seq204
Length=21219
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| |||||| ||| || |||||||| || ||||||
Sbjct 5911 CCGCCACGCAGGCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 5852
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || |||||||| ||
Sbjct 5851 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 5792
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | |||||| ||||| ||||| | || ||
Sbjct 5791 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGCTCTCCACC 5732
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || |||||||||||||||||||| ||||||||
Sbjct 5731 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 5685
>seq233
Length=18884
Score = 159 bits (176), Expect = 6e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | |||| ||| ||||| ||||| || |||||||| || |||
Sbjct 2033 CCGCCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2092
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || ||||| || ||
Sbjct 2093 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 2152
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | ||||||| ||||| ||||| | || || ||
Sbjct 2153 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACC 2212
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|||| |||||| || || || ||||| ||||||||||| || ||||| |||
Sbjct 2213 TCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCATGATG 2263
Score = 152 bits (168), Expect = 9e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | |||| ||| |||||| ||| || || ||||| || |||||
Sbjct 1577 CCACCGCGCAGACGGAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 1636
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| |||||| || | |||||| || ||||| || || | || ||||| || ||
Sbjct 1637 AGCGTCCGCCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGCGGG 1696
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413
||||| |||||||| || ||||| | ||||||| ||||| ||||| |||| | || ||
Sbjct 1697 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTC-GCTGCTCTCCAC 1755
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || ||||| ||||||||||| || ||||||||
Sbjct 1756 CTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1803
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | |||| ||| ||||| ||||| || || ||||| || |||
Sbjct 1805 CCACCGCGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 1864
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || || || ||||| | || ||||| || ||
Sbjct 1865 AGGGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGCGGG 1924
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| || |||||||| | ||||||| ||||| ||||| | || || ||
Sbjct 1925 ATGCCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACC 1984
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| |||||| || || || ||||| ||||||||||| || |||||
Sbjct 1985 TCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 2031
Score = 138 bits (152), Expect = 2e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||| ||| |||||| ||| || |||||||| || || ||
Sbjct 1349 CCACCCCGCAGCCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 1408
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| ||| || || | |||||| || || || || || | || ||||| || ||
Sbjct 1409 AGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGCCGCTGCTGGTCCGGCGGG 1468
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413
|| || |||||||| || ||||| | ||||||| || || ||||| |||| | || ||
Sbjct 1469 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTC-GCTGCTCTCCAC 1527
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || ||||| |||||||||||||| ||||||||
Sbjct 1528 CTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 1575
>seq1
Length=398088
Score = 134 bits (148), Expect = 3e-26
Identities = 319/473 (67%), Gaps = 12/473 (3%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || ||| |||||||||| |||||| |
Sbjct 37106 CATGACACCGGCCTTCTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCC 37047
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTT-CTCG-GCGCCAAACTGCTTGGGGTAA 10052
||||| ||| ||||||||||||||||||||| |||| ||| | || |||| ||
Sbjct 37046 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGCTCGAGCGGTACAC--CTTGTCGTTG 36989
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| | | | ||| || ||||| ||||| |||||||| |||| || ||||
Sbjct 36988 CCGAGAGAAACCAGCAGGCGATCGGCCACAAACTCAATGTACTGCTTCATGAGCGTCGAG 36929
Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172
|||||||| | || | |||||| | || ||| | ||| |||| ||| | |||
Sbjct 36928 TTCATGCCCAGCAGGGCGCAGGGCAGAGCCTCGGTGAGGAACTCCTGCTCGATCTTGACG 36869
Query 10173 GCTTCCTCGACGATG--CTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230
|| || ||| |||| ||| || | | || | || ||||| || | ||
Sbjct 36868 GCATCGACGATGATGTCCTCAATAAC-CTTCTTGCTGGGGC-GGTTCTTCAGATGGGAGA 36811
Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
|||| || | || | ||| ||||||||||| || ||| | ||||||||| |
Sbjct 36810 ACAGCAGGCAGGCGAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGA 36751
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350
| ||| |||||||| || || || || ||||||||| |||| |||| | |||
Sbjct 36750 AGGTCAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGAGAAAGCGCCGC 36691
Query 10351 AGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
|| |||||| ||||| ||| | | ||||| || |||| || ||||
Sbjct 36690 TGA--AGAAGATGCCCTCGACGGCAGCGAATGCGACCAGACGCTGCGCAAAGG 36640
>seq600
Length=83923
Score = 107 bits (118), Expect = 4e-18
Identities = 137/186 (74%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 224975 GCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGG 225034
||||| |||||||| | |||||||||||| ||| | |||||||| |||| | || | |
Sbjct 62066 GCATAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGCTCG 62007
Query 225035 AAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGA 225094
| || ||||| | ||| | ||||||| |||||| |||||| ||| | |||||
Sbjct 62006 AGCGCGTGCTGCTTGATGTAGCCGATGCGCAGGTTGGGGTGCTTCTCCACCTTG-CCCGA 61948
Query 225095 G-TCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGG 225153
| | || ||||||| || || | |||||| ||||| | ||||||||| || |||||
Sbjct 61947 GCTGGGCACCACCTCGCCCGTCAGCAGCTTGATCAGCGTCGACTTGCCCGCGCCGTTGGG 61888
Query 225154 GCCAAT 225159
||| ||
Sbjct 61887 GCCGAT 61882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921611985666880
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