Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq197 178 2e-39 seq204 170 4e-37 seq233 159 6e-34 seq1 134 3e-26 seq600 107 4e-18 >seq197 Length=21987 Score = 178 bits (196), Expect = 2e-39 Identities = 712/1092 (65%), Gaps = 72/1092 (7%) Strand=Plus/Plus Query 224942 GCGCGATCAACCGACTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTG 225001 || || || | || ||| |||||| ||| | | | |||||||||||||||| Sbjct 6233 GCCCGGTCCATCGTCTCGCGGTCCTCGCCCGTGCGGAAACGCCACTGGATGTACTCCGAC 6292 Query 225002 GGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATG 225061 || ||| ||||||||||||| ||||| || || || ||||| | |||||| || Sbjct 6293 GGCGTCTTGTCCAGGTGGTTGTCAATGTGCGCAAACGCGTGCTGCTTGATGTACGCAATC 6352 Query 225062 CGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACC 225121 |||||||| |||| |||| ||| | ||||| |||||| || || || Sbjct 6353 CGCATGTTCTCGTGCTGGTACACCTCGCCGCTCGTCGGGATCAGCTCGCCCGTCAGCACG 6412 Query 225122 TTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACATT 225181 |||| ||||| | |||||||||||| |||||||||||||| | || || || || Sbjct 6413 TTGACCAGCGTCGACTTGCCCGCACCGTTGGGGCCAATCACCGCGATACGCGAGCTCAGC 6472 Query 225182 GCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGG-----GCCAGTTTGG-TAAGCAAAG 225235 | ||| | ||||||| |||||| || || ||| || || ||| Sbjct 6473 GAGCACTGGAACGTCACGTTCG---AGATCTGCGGCTTCGGCGTGTTCGGGTACTGGAAG 6529 Query 225236 GCCACGCCA--CGCAGCTTCATGATGGCACGGTCCTTGGAAGTAATACCCTCCAGGAACC 225293 || | ||| || || |||||| | |||||| | | ||||||||||| | Sbjct 6530 CTCATGTTGGTCGC-GCG-CAGGATGGCCTTGGCCTTGGTCTTGACGCCCTCCAGGAAAC 6587 Query 225294 CGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTAGTAAGATGCAGC-C 225352 ||||||||||||| ||| || ||| | ||| |||||||| | || | Sbjct 6588 CGGGCTCGGGGAAGGTGAACTCCATCTCCGACGCGCCCAGCTCGTAGTACGCCTTGGCGC 6647 Query 225353 TCGG--GTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGT 225410 |||| | |||| | || || || |||||| || ||| | ||||||||| | Sbjct 6648 TCGGCAGGCGCT---CGACAAACGCCTTCAGGTTGCCCCGGTAGCGCTTGAGCTTGAAGC 6704 Query 225411 TCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGAC 225469 || |||| || | || ||| | |||||| ||| |||||||| || ||||| ||| Sbjct 6705 GCT---CGTAGTGGATGATGTGCTG-GCACACGTTGTCCAGGAAGCCCGAATCGTGCGAC 6760 Query 225470 ACAATGATGGACGA-CACGTTCGTCAGGCCCTTGA---GGTGCGTGATG-AGCCATGCCA 225524 || ||||| |||| |||| || || |||| ||| || | ||||| | Sbjct 6761 ACGATGATCGACGTGCACGG-CG--AG----TTGATCAGGTA-GTCCTCCAGCCACTTGA 6812 Query 225525 CGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGA 225584 |||| | ||||||| |||||| || || |||||||| ||||| ||||| | | || Sbjct 6813 CGTTCTTCACGTCCAAGTGGTTGGTCGGCTCGTCCAGCAGCAGAATGTCCGGCGCCTCGA 6872 Query 225585 GGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT-TGAA 225643 | ||| || || | ||||||||| |||||||| || ||||||| |||| || Sbjct 6873 ACACGGCACGGCACAGGGCCAGCTTCATCTTCCAGCCACCAGACAGGG--CCGAGATGTC 6930 Query 225644 ACAGAGTGCTTAGCT--TCGTCAAAGCCGTACTC---CAGGAGCGTCTGGATAATGCGCT 225698 | ||| | | || ||| |||||| |||| |||| || | ||| | | || Sbjct 6931 GCCC-GTGATCATCTGGTCGGAGAAGCCGAACTCGCCCAGGCGCTT---GATGACGTCCT 6986 Query 225699 CG--GGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGA--------GGT--AATCAT 225746 | ||||| || | || |||| |||| | || ||| | ||| Sbjct 6987 CCTTGGAGACCT--------CGACCTTGGCCTCGGCC-AGCTTCTTCATGGTCCAGTCAA 7037 Query 225747 ATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT 225806 |||||| |||| | | || ||| | |||||| || ||| |||| ||| || || Sbjct 7038 TCGTGGTCATCTCCGTGTCCTCCGAGTCCAGGTCGTGCTCGACGAACACGGTCTTGACCT 7097 Query 225807 -GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTC 225865 | || | |||||||||||| | ||| |||| || || || | ||| || | Sbjct 7098 CGCTCTGCTT-GGGGAAGCCCTCGACCTGCTCATTGTTGATGGCGCGCATCAGCGTCGAC 7156 Query 225866 TTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGC 225925 ||||||| |||||||||||| |||||||| | | |||||||| | ||| | Sbjct 7157 TTGCCCGAACCGTTGGGACCGCACAGGCCGTAGCGCTGGCCGCGCTTCAGACGCAGGTGG 7216 Query 225926 GTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCC 225985 || |||||| ||||||||| |||| || || || |||||| ||| | |||||||||| Sbjct 7217 GTCTGGTTCAGCAGGATCTTGGCACCGTACGCGAGCGAGAACGTGCAGTTGCACAGGTCC 7276 Query 225986 TCACCCTCCTCG 225997 || ||||||||| Sbjct 7277 TCGCCCTCCTCG 7288 Score = 100 bits (110), Expect = 5e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 224495 GAAAGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACG 224554 || |||||||| ||||| |||||||| ||| ||||||||||||| ||||| | || | | Sbjct 5741 GACAGCGCGCCCAGCGAGTCGCGGTCCAGGTAGTTCGTCGGCTCGTCCAGCACAATCAAG 5800 Query 224555 TGGGGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGG 224614 || || | ||||||| | || | | ||||| ||| ||| ||| ||||| || || Sbjct 5801 TGCGGCCGCTGCCACGAGCACGCCGCCAGCACCACCTTGACCCGCTGCCCGCCCGACAGA 5860 Query 224615 CCGCGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGC 224664 || || ||||||||||| | | | || | ||| || |||| ||||| Sbjct 5861 CCCCGCATCCGCGAGTGCGAGATCAGCTCCGCGTCCAGCCCAAAGTTGGC 5910 >seq204 Length=21219 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| |||| ||| |||||| ||| || |||||||| || |||||| Sbjct 5911 CCGCCACGCAGGCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 5852 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || |||||||| || Sbjct 5851 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 5792 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | |||||| ||||| ||||| | || || Sbjct 5791 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGCTCTCCACC 5732 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || |||||||||||||||||||| |||||||| Sbjct 5731 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 5685 >seq233 Length=18884 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 2033 CCGCCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 2092 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || || Sbjct 2093 AGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 2152 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||||||| ||||| ||||| | || || || Sbjct 2153 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACC 2212 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||| |||||| || || || ||||| ||||||||||| || ||||| ||| Sbjct 2213 TCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCATGATG 2263 Score = 152 bits (168), Expect = 9e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| ||| |||||| ||| || || ||||| || ||||| Sbjct 1577 CCACCGCGCAGACGGAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 1636 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| |||||| || | |||||| || ||||| || || | || ||||| || || Sbjct 1637 AGCGTCCGCCCATCCTCCAGCTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGCGGG 1696 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413 ||||| |||||||| || ||||| | ||||||| ||||| ||||| |||| | || || Sbjct 1697 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTC-GCTGCTCTCCAC 1755 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || ||||| ||||||||||| || |||||||| Sbjct 1756 CTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1803 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| ||| ||||| ||||| || || ||||| || ||| Sbjct 1805 CCACCGCGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTC 1864 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || ||||| | || ||||| || || Sbjct 1865 AGGGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGCGGG 1924 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| | ||||||| ||||| ||||| | || || || Sbjct 1925 ATGCCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACC 1984 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||| || || || ||||| ||||||||||| || ||||| Sbjct 1985 TCCAGGGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 2031 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| |||||| ||| || |||||||| || || || Sbjct 1349 CCACCCCGCAGCCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 1408 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| ||| || || | |||||| || || || || || | || ||||| || || Sbjct 1409 AGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGCCGCTGCTGGTCCGGCGGG 1468 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTAC 68413 || || |||||||| || ||||| | ||||||| || || ||||| |||| | || || Sbjct 1469 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTC-GCTGCTCTCCAC 1527 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || ||||| |||||||||||||| |||||||| Sbjct 1528 CTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 1575 >seq1 Length=398088 Score = 134 bits (148), Expect = 3e-26 Identities = 319/473 (67%), Gaps = 12/473 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || ||| |||||||||| |||||| | Sbjct 37106 CATGACACCGGCCTTCTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCC 37047 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTT-CTCG-GCGCCAAACTGCTTGGGGTAA 10052 ||||| ||| ||||||||||||||||||||| |||| ||| | || |||| || Sbjct 37046 CAGGGAGATGTTCTCCATGAAGTCAAAGGGGTTGCTCGAGCGGTACAC--CTTGTCGTTG 36989 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| | | | ||| || ||||| ||||| |||||||| |||| || |||| Sbjct 36988 CCGAGAGAAACCAGCAGGCGATCGGCCACAAACTCAATGTACTGCTTCATGAGCGTCGAG 36929 Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 |||||||| | || | |||||| | || ||| | ||| |||| ||| | ||| Sbjct 36928 TTCATGCCCAGCAGGGCGCAGGGCAGAGCCTCGGTGAGGAACTCCTGCTCGATCTTGACG 36869 Query 10173 GCTTCCTCGACGATG--CTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || ||| |||| ||| || | | || | || ||||| || | || Sbjct 36868 GCATCGACGATGATGTCCTCAATAAC-CTTCTTGCTGGGGC-GGTTCTTCAGATGGGAGA 36811 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 |||| || | || | ||| ||||||||||| || ||| | ||||||||| | Sbjct 36810 ACAGCAGGCAGGCGAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGA 36751 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||| |||||||| || || || || ||||||||| |||| |||| | ||| Sbjct 36750 AGGTCAGGCCGGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGAGAAAGCGCCGC 36691 Query 10351 AGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || |||||| ||||| ||| | | ||||| || |||| || |||| Sbjct 36690 TGA--AGAAGATGCCCTCGACGGCAGCGAATGCGACCAGACGCTGCGCAAAGG 36640 >seq600 Length=83923 Score = 107 bits (118), Expect = 4e-18 Identities = 137/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 224975 GCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGG 225034 ||||| |||||||| | |||||||||||| ||| | |||||||| |||| | || | | Sbjct 62066 GCATAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGCTCG 62007 Query 225035 AAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGA 225094 | || ||||| | ||| | ||||||| |||||| |||||| ||| | ||||| Sbjct 62006 AGCGCGTGCTGCTTGATGTAGCCGATGCGCAGGTTGGGGTGCTTCTCCACCTTG-CCCGA 61948 Query 225095 G-TCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGG 225153 | | || ||||||| || || | |||||| ||||| | ||||||||| || ||||| Sbjct 61947 GCTGGGCACCACCTCGCCCGTCAGCAGCTTGATCAGCGTCGACTTGCCCGCGCCGTTGGG 61888 Query 225154 GCCAAT 225159 ||| || Sbjct 61887 GCCGAT 61882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921611985666880