Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 5e-11 >seq1 Length=398088 Score = 84.2 bits (92), Expect = 5e-11 Identities = 172/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||| || || || | | ||| |||| ||| | ||| ||| | || ||| Sbjct 36855 ATCATCGTCGATGCCGTCAAGATCGAGCAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCC 36914 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| |||||| |||||||| || || || ||||| ||| | Sbjct 36915 CTGCTGGGCATGAACTCGACGCTCATGAAGCAGTACATTGAGTTTGTGGCCGATCGCCTG 36974 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | | || || | || || |||||| ||| | |||||||||| ||| |||||| Sbjct 36975 CTGGTTTCTCTCGGCAACGACAAGGTGTACCGCTCGAGCAACCCCTTTGACTTCATGGAG 37034 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740 ||| || || || || || |||||||| || ||||||||| | || || || | | Sbjct 37035 AACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGCGACTACCAGAAG 37094 Query 243741 CCCTGGTGTGATG 243753 || ||||| ||| Sbjct 37095 GCC-GGTGTCATG 37106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102867225892400