Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 84.2 5e-11
>seq1
Length=398088
Score = 84.2 bits (92), Expect = 5e-11
Identities = 172/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||| || || || | | ||| |||| ||| | ||| ||| | || |||
Sbjct 36855 ATCATCGTCGATGCCGTCAAGATCGAGCAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCC 36914
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | ||||||||||| |||||| |||||||| || || || ||||| ||| |
Sbjct 36915 CTGCTGGGCATGAACTCGACGCTCATGAAGCAGTACATTGAGTTTGTGGCCGATCGCCTG 36974
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | | || || | || || |||||| ||| | |||||||||| ||| ||||||
Sbjct 36975 CTGGTTTCTCTCGGCAACGACAAGGTGTACCGCTCGAGCAACCCCTTTGACTTCATGGAG 37034
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740
||| || || || || || |||||||| || ||||||||| | || || || | |
Sbjct 37035 AACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGCGACTACCAGAAG 37094
Query 243741 CCCTGGTGTGATG 243753
|| ||||| |||
Sbjct 37095 GCC-GGTGTCATG 37106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102867225892400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |