Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq376 168 8e-37 seq1 98.7 1e-15 >seq376 Length=8930 Score = 168 bits (186), Expect = 8e-37 Identities = 1066/1691 (63%), Gaps = 49/1691 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || |||||||| ||| ||||||| | | |||||| || Sbjct 5142 CGCAGGTAGTACATACCGGTCTTGAGTCCCAACTTCCAGCCCGTAAAATGCATGCTGGTA 5201 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 113715 | |||| | || || |||| | ||| | || || || |||||||| Sbjct 5202 ATCTTGCCCATAGTCGGTGCGCGCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAAC 5261 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTT 113773 ||| ||||| || |||||||| | | || ||| | | | ||| |||||||| || Sbjct 5262 GCG-CCACGGTCGGCCGCCATCTGCA-CA-ATCGTGCGCTGCGAGATCTCCCACACTGTC 5318 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| || ||| || ||| | ||||| | | ||| || |||| || || ||| | Sbjct 5319 TTGTACAGCGCCTTGATTTCAGCCGGGATGTTCGGGATGTTCTGGACCGACCCGCCCTCT 5378 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 | ||| | | |||||| | | ||||| || || || | || |||| || Sbjct 5379 GCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTCCACCAGGTCCTTCAGA 5438 Query 113894 AG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 113951 || ||| | |||| || ||||| || || || || | | | ||||| |||| Sbjct 5439 AGCCATGGGT--TGACCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGG 5496 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 |||||||||||| ||||| || ||||| |||| ||| || | ||| || || || |||| Sbjct 5497 ACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCA 5556 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGG---- 114067 | || |||| | || ||||| || | || | ||| | || |||||| Sbjct 5557 TCGGCGCCACCAACAGACTGTTGCGCACGCCGTGCTCCTTGAT------CTTGAGACGCA 5610 Query 114068 --GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATAC 114125 | ||||||||| | | | | | || | | ||||||||||||||| ||||| | Sbjct 5611 GCGAGTCCCAGTCCCACAGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGC 5670 Query 114126 CTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG 114185 | || || | || || ||||| | ||| ||| |||||| | || ||||| ||| Sbjct 5671 CCTGCGACACGGGAGACCCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGC 5730 Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 | |||| || || ||||| || || |||||||| || | || | | | Sbjct 5731 ATGACGCCGTCAGCGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCG 5790 Query 114246 CCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACA 114304 |||| || ||||| | | || ||| | | || ||||||| | || |||||| Sbjct 5791 CCTCCGGCGACTCAAAAGGCA-TCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACA 5849 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 || | || || || || || | ||| || || || || | ||| || || | Sbjct 5850 CCCACACCGATCGGCCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAG 5909 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 || ||||| | | || || || || |||| |||| || |||||||| Sbjct 5910 TTGACGTCGATGATACGGTTCAGGTTGCGCACCACCACCTGCGTGACCTCGTGAAGCTTC 5969 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | | | || | | | | | | ||| | || || || | |||| ||| Sbjct 5970 TGGAAGTCGTACGTCTCGTTGGCGTAGTCCACAAAAGACGGCAGCGCCAGCGACGACAGG 6029 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 || ||||| | |||||| | |||||| ||||| || || |||| || || Sbjct 6030 TTGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAG 6089 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 || |||||||||| |||||| || || ||| ||| || |||||||| ||| Sbjct 6090 CTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGC 6149 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGC 114663 ||| | || | || |||||||| || | || || | || | ||| | | || | | | Sbjct 6150 ATGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCC 6209 Query 114664 TGGCACAGTGGCGTTGGCT-CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 114722 | | || ||| || ||| || ||||||| ||||||||| ||| | ||| || |||| Sbjct 6210 TTG-ACCGTG-CGACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACT 6267 Query 114723 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 114782 | || || | || | || || || || || ||||| | || | ||| | | Sbjct 6268 CGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGC 6327 Query 114783 CACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCC 114842 | || ||| |||||||||||||| ||||| ||||||||||| || ||| || || | Sbjct 6328 CGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGC 6387 Query 114843 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 114902 | ||| | || || | || || || |||| || | || || | | || | Sbjct 6388 GGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCAG 6447 Query 114903 CGTGCCACGGTTCCAGGT------ACACCGCGATTGACCCCTTACGACGACCAGCCTGGT 114956 | |||||||| ||||||| | | ||| || || ||| ||| |||||| Sbjct 6448 CATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTT---GTTTCCACCCTGGT 6504 Query 114957 TTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGC 115016 ||||| | || ||| || || ||||| ||||| || | || || | ||| | Sbjct 6505 CCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTAC 6564 Query 115017 CATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAAT 115074 | || || || || || ||| | | |||| | || |||| || ||| || || Sbjct 6565 CGTTGGTGCCGGCAATGTATGAGCC--AGTGGCGCGGATGCGGTGGACGTTCATCCCGAT 6622 Query 115075 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGAT 115134 || || ||| ||| ||||| ||||| | |||| || ||||||| || || || Sbjct 6623 GCCACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCGTAGATGCCCTCAAT 6682 Query 115135 CGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG-TGGCCTT--GGTGTACC 115191 |||| |||| | | | |||||||| |||| | ||| ||| || || || Sbjct 6683 GCTGTCATCCTTCATGTCAACCAGGAAGCA---CGACGCGAGCTGGGCTTGGGGCGTGCC 6739 Query 115192 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGG 115250 ||||||||| || || || | |||||| |||| | || | | |||||| | | ||| | Sbjct 6740 AGCGTTGAAAAGCGTGGGCGACGCGTGTGTGAAGA-ACTTGTTGGACATGTAGTTGTACG 6798 Query 115251 TCTCCAAGACG 115261 |||||| |||| Sbjct 6799 TCTCCAGGACG 6809 >seq1 Length=398088 Score = 98.7 bits (108), Expect = 1e-15 Identities = 295/454 (65%), Gaps = 10/454 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| || || |||||||| |||||||| ||||| ||| ||| | ||| |||||||| Sbjct 37088 GTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 37029 Query 125818 AAAATCAAATGGGTTCTTTGAGT--TCCAAATTGTTGGCACCCC---AATCTGTTTGAGG 125872 || ||||| ||||| | ||| | || |||| | || || | || Sbjct 37028 GAAGTCAAAGGGGTTGCTCGAGCGGTACACCTTGTCGTTGCCGAGAGAAACC-----AGC 36974 Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932 || ||||| | || |||||||||||| ||| | |||||||| || | ||| Sbjct 36973 AGGCGATCGGCCACAAACTCAATGTACTGCTTCATGAGCGTCGAGTTCATGCCCAGCAGG 36914 Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992 || || || || || || |||| ||| ||| || | ||||| || | |||| Sbjct 36913 GCGCAGGGCAGAGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCATCGACGATGATG 36854 Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 | | ||| | | | || | || || | ||| || ||| || Sbjct 36853 TCCTCAATAACCTTCTTGCTGGGGCGGTTCTTCAGATGGGAGAACAGCAGGCAGGCGAAG 36794 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| || ||||||||||| ||||| || || || |||||| ||| || ||||| Sbjct 36793 TCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATC 36734 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 || || |||||||||| |||||| || | | || | || ||||||||| ||||| Sbjct 36733 AGGCCGCGCTTCTTCAGCCAGAAGATGGACGAGAAAGCGCCGCTGAAGAAGATGCCCTCG 36674 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || ||||| || | ||||||| ||||||| Sbjct 36673 ACGGCAGCGAATGCGACCAGACGCTGCGCAAAGG 36640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346849904320