Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq376 168 8e-37
seq1 98.7 1e-15
>seq376
Length=8930
Score = 168 bits (186), Expect = 8e-37
Identities = 1066/1691 (63%), Gaps = 49/1691 (3%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| || |||||||| ||| ||||||| | | |||||| ||
Sbjct 5142 CGCAGGTAGTACATACCGGTCTTGAGTCCCAACTTCCAGCCCGTAAAATGCATGCTGGTA 5201
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA- 113715
| |||| | || || |||| | ||| | || || || ||||||||
Sbjct 5202 ATCTTGCCCATAGTCGGTGCGCGCATGTGAATGTTGAGCGACTGCGACTGGTCGATGAAC 5261
Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTT 113773
||| ||||| || |||||||| | | || ||| | | | ||| |||||||| ||
Sbjct 5262 GCG-CCACGGTCGGCCGCCATCTGCA-CA-ATCGTGCGCTGCGAGATCTCCCACACTGTC 5318
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| || ||| | ||||| | | ||| || |||| || || ||| |
Sbjct 5319 TTGTACAGCGCCTTGATTTCAGCCGGGATGTTCGGGATGTTCTGGACCGACCCGCCCTCT 5378
Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893
| ||| | | |||||| | | ||||| || || || | || |||| ||
Sbjct 5379 GCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTCCACCAGGTCCTTCAGA 5438
Query 113894 AG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGG 113951
|| ||| | |||| || ||||| || || || || | | | ||||| ||||
Sbjct 5439 AGCCATGGGT--TGACCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGG 5496
Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011
|||||||||||| ||||| || ||||| |||| ||| || | ||| || || || ||||
Sbjct 5497 ACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCA 5556
Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGG---- 114067
| || |||| | || ||||| || | || | ||| | || ||||||
Sbjct 5557 TCGGCGCCACCAACAGACTGTTGCGCACGCCGTGCTCCTTGAT------CTTGAGACGCA 5610
Query 114068 --GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATAC 114125
| ||||||||| | | | | | || | | ||||||||||||||| ||||| |
Sbjct 5611 GCGAGTCCCAGTCCCACAGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGC 5670
Query 114126 CTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGG 114185
| || || | || || ||||| | ||| ||| |||||| | || ||||| |||
Sbjct 5671 CCTGCGACACGGGAGACCCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGC 5730
Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245
| |||| || || ||||| || || |||||||| || | || | | |
Sbjct 5731 ATGACGCCGTCAGCGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCG 5790
Query 114246 CCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACA 114304
|||| || ||||| | | || ||| | | || ||||||| | || ||||||
Sbjct 5791 CCTCCGGCGACTCAAAAGGCA-TCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACA 5849
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364
|| | || || || || || | ||| || || || || | ||| || || |
Sbjct 5850 CCCACACCGATCGGCCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAG 5909
Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424
|| ||||| | | || || || || |||| |||| || ||||||||
Sbjct 5910 TTGACGTCGATGATACGGTTCAGGTTGCGCACCACCACCTGCGTGACCTCGTGAAGCTTC 5969
Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484
| | | || | | | | | | ||| | || || || | |||| |||
Sbjct 5970 TGGAAGTCGTACGTCTCGTTGGCGTAGTCCACAAAAGACGGCAGCGCCAGCGACGACAGG 6029
Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544
|| ||||| | |||||| | |||||| ||||| || || |||| || ||
Sbjct 6030 TTGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAG 6089
Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604
|| |||||||||| |||||| || || ||| ||| || |||||||| |||
Sbjct 6090 CTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGC 6149
Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGC 114663
||| | || | || |||||||| || | || || | || | ||| | | || | | |
Sbjct 6150 ATGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCC 6209
Query 114664 TGGCACAGTGGCGTTGGCT-CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 114722
| | || ||| || ||| || ||||||| ||||||||| ||| | ||| || ||||
Sbjct 6210 TTG-ACCGTG-CGACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACT 6267
Query 114723 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 114782
| || || | || | || || || || || ||||| | || | ||| | |
Sbjct 6268 CGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGC 6327
Query 114783 CACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCC 114842
| || ||| |||||||||||||| ||||| ||||||||||| || ||| || || |
Sbjct 6328 CGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGC 6387
Query 114843 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 114902
| ||| | || || | || || || |||| || | || || | | || |
Sbjct 6388 GGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCAG 6447
Query 114903 CGTGCCACGGTTCCAGGT------ACACCGCGATTGACCCCTTACGACGACCAGCCTGGT 114956
| |||||||| ||||||| | | ||| || || ||| ||| ||||||
Sbjct 6448 CATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTT---GTTTCCACCCTGGT 6504
Query 114957 TTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGC 115016
||||| | || ||| || || ||||| ||||| || | || || | ||| |
Sbjct 6505 CCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTAC 6564
Query 115017 CATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAAT 115074
| || || || || || ||| | | |||| | || |||| || ||| || ||
Sbjct 6565 CGTTGGTGCCGGCAATGTATGAGCC--AGTGGCGCGGATGCGGTGGACGTTCATCCCGAT 6622
Query 115075 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGAT 115134
|| || ||| ||| ||||| ||||| | |||| || ||||||| || || ||
Sbjct 6623 GCCACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTGAGGGTGTCGTAGATGCCCTCAAT 6682
Query 115135 CGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG-TGGCCTT--GGTGTACC 115191
|||| |||| | | | |||||||| |||| | ||| ||| || || ||
Sbjct 6683 GCTGTCATCCTTCATGTCAACCAGGAAGCA---CGACGCGAGCTGGGCTTGGGGCGTGCC 6739
Query 115192 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGG 115250
||||||||| || || || | |||||| |||| | || | | |||||| | | ||| |
Sbjct 6740 AGCGTTGAAAAGCGTGGGCGACGCGTGTGTGAAGA-ACTTGTTGGACATGTAGTTGTACG 6798
Query 115251 TCTCCAAGACG 115261
|||||| ||||
Sbjct 6799 TCTCCAGGACG 6809
>seq1
Length=398088
Score = 98.7 bits (108), Expect = 1e-15
Identities = 295/454 (65%), Gaps = 10/454 (2%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| || || |||||||| |||||||| ||||| ||| ||| | ||| ||||||||
Sbjct 37088 GTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCAT 37029
Query 125818 AAAATCAAATGGGTTCTTTGAGT--TCCAAATTGTTGGCACCCC---AATCTGTTTGAGG 125872
|| ||||| ||||| | ||| | || |||| | || || | ||
Sbjct 37028 GAAGTCAAAGGGGTTGCTCGAGCGGTACACCTTGTCGTTGCCGAGAGAAACC-----AGC 36974
Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932
|| ||||| | || |||||||||||| ||| | |||||||| || | |||
Sbjct 36973 AGGCGATCGGCCACAAACTCAATGTACTGCTTCATGAGCGTCGAGTTCATGCCCAGCAGG 36914
Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992
|| || || || || || |||| ||| ||| || | ||||| || | ||||
Sbjct 36913 GCGCAGGGCAGAGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCATCGACGATGATG 36854
Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052
| | ||| | | | || | || || | ||| || ||| ||
Sbjct 36853 TCCTCAATAACCTTCTTGCTGGGGCGGTTCTTCAGATGGGAGAACAGCAGGCAGGCGAAG 36794
Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112
|| ||| || ||||||||||| ||||| || || || |||||| ||| || |||||
Sbjct 36793 TCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATC 36734
Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172
|| || |||||||||| |||||| || | | || | || ||||||||| |||||
Sbjct 36733 AGGCCGCGCTTCTTCAGCCAGAAGATGGACGAGAAAGCGCCGCTGAAGAAGATGCCCTCG 36674
Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| ||||| || | ||||||| |||||||
Sbjct 36673 ACGGCAGCGAATGCGACCAGACGCTGCGCAAAGG 36640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597346849904320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |