Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq376 389 4e-103 >seq376 Length=8930 Score = 389 bits (430), Expect = 4e-103 Identities = 1137/1724 (66%), Gaps = 52/1724 (3%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| |||||||| || ||| | | ||| Sbjct 6940 AACTACCAATACTTTGGCTTCAAGACGCTGGAGCGTTCGTACCTGCTTAAGCTCAACGGC 6881 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | | ||||| || || || || | |||||||| || ||||||| ||| || Sbjct 6880 AAGATCGTTGAGCGGCCCCAGCACATGATCATGCGCGTGGCGGTCGGGATCTGGGGCGAC 6821 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || || | || || | | | || ||||| ||||| | || || Sbjct 6820 AACGTGGAGCGCGTCCTGGAGACGTACAACTACATGTCCAACAAGTTCTTCACACACGCG 6761 Query 93895 ACCCCGACCCTGTTCAACGCGGGGAC-CCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || |||||||| || || ||| ||| ||| | | ||||| |||||| | Sbjct 6760 TCGCCCACGCTTTTCAACGCTGGCACGCCCCAAGCC-CAGCTCGCGTCGTGCTTCCTGGT 6702 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| ||| || || | ||||| ||||||| || || | | Sbjct 6701 TGAC-ATGAAGGATGACAGCATTGAGGGCATCTACGACACCCTCAAGACTTGCGCTATGA 6643 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || ||||| || |||||||| | |||||| | | || |||| || || | Sbjct 6642 TCTCCAAGACGGCGGGTGGCATCGGGATGAACGTCCACCGCATCCGCGCCACTGGCTCAT 6583 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| ||| ||||| || || ||||||||| | ||||||||||| || || ||||||| Sbjct 6582 ACATTGCCGGCACCAACGGTACATCCAACGGCATTGTCCCTATGCTGCGCGTGTTCAACA 6523 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || |||| ||||| |||||||||||||| | | || || | ||| |||| | Sbjct 6522 ACACGGCCCGCTATGTGGACCAGGGTGGAAACAAGCGGCCAGGCGCCTTCTGCATCTACC 6463 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| ||||| || |||||| | ||| |||||||||| |||||||| ||||| | Sbjct 6462 TGGAGCCGTGGCATGCTGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCATGGCAAGG 6403 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || | ||| | ||||| ||| || |||||| | || ||||| || ||||| | Sbjct 6402 AGGAGGTACGCGCCCGCGACCTGTTCCTGGCGCTCTGGATCCCGGACCTGTTCATGAAGC 6343 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||| ||| || ||||| || | || |||||||| || || || ||| ||| Sbjct 6342 GTGTGGAGAAGAACGGCGACTGGACGCTGATGTGCCCCAATGAGTGCCCGGGTCTGGCCG 6283 Query 94373 AC-GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGC 94430 || | | | || | || || | |||||| | ||||| | |||| | ||| Sbjct 6282 ACTGCTACGGCGACGAG-TTCGAGGCCTTGTACGAGAAGTACGAGAAGGAGGGCCGTGGC 6224 Query 94431 C--AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | | ||| | | || |||||||||| || || |||| | ||| |||| Sbjct 6223 CGTCGCACGGTCA---AGGCCCAGAAGCTGTGGTATGCCGTCCTGGAGGCGCAGACGGAG 6167 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 || || | || | ||| ||| |||||| | ||| |||| |||| ||||||| || | Sbjct 6166 ACCGGCAACCCGTTCATGCTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAA 6108 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| || ||| ||||| || |||||||| |||||| ||||||| | || || Sbjct 6107 CCTGGGCACCATCCGCAGCTCCAACCTGTGCACAGAGATTATCGAGTACTGCGCGCCCGA 6048 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| | || ||||| |||||| || | ||| | |||| ||| | || Sbjct 6047 TGAGGTGGCGGTGTGCAACCTGTCGTCGCTGGCGCTGCCGTCTTTTGTG------GACT- 5995 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727 ||| | || | ||| ||| | || ||||| | || | | ||| |||| | Sbjct 5994 -ACGCCAAC-GAGACGTACGACTTCCAGAAGCTTCACGAGGTCAC--GCAGG-TGGTGGT 5940 Query 94728 G---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTC 94784 | ||||||||| | | |||||| |||| |||||| || ||||||||| ||| Sbjct 5939 GCGCAACCTGAACCGTATCATCGACGTCAACTACTACCCTGTGCCGGAGGCGCGCAACAG 5880 Query 94785 AAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGAT 94844 ||| || || ||||| ||||| | || |||||||| || ||||| ||| | || Sbjct 5879 CAACATGCGTCACCGGCCGATCGGTGTGGGTGTCCAGGGCTTGGCGGATGCGTTCCTGGC 5820 Query 94845 GATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGT---TTGAATTTGAACATATTCGA 94901 | |||| |||| | || || | || | |||| || | || | | || || || Sbjct 5819 GCTGCGGATGCCTTTTGAGTC-GCCG--GAGGCGCGTGAGCTCAACAAGCAGATCTTTGA 5763 Query 94902 AAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCC 94961 | || || ||| || ||| || | || |||| | ||| |||| | Sbjct 5762 GACGATCTACCACGCTGCGCTGACGGCGTCATGCGACCTGGCGAAGCTGGAGGGCGTG-T 5704 Query 94962 ACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021 || ||| ||| | || || ||| || |||||||| | ||||| || | |||| Sbjct 5703 ACTCGA--CGTACGAGGGGTCTCCCGTGTCGCAGGGCATCCTGCAGTTTGATATGTGGGA 5646 Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCA---AACA 95078 || ||||| ||| |||| |||||||| | || || || | | |||| | || Sbjct 5645 CGTCAAGCCGACGGACCTGTGGGACTGGGACTCGCTGCG-TCTCAAG--ATCAAGGAGCA 5589 Query 95079 CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCT 95138 ||| ||| ||| ||| | ||||| || ||||| ||||| || || |||||||||| Sbjct 5588 CGGCGTGCGCAACAGTCTGTTGGTGGCGCCGATGCCGACGGCATCGACCTCGCAGATCCT 5529 Query 95139 TGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGC 95198 ||||||||||| | ||||| || | ||| |||||| | ||| | | || ||||| || Sbjct 5528 GGGCAACAACGAATGCTTCGAGCCATACACGTCCAACATCTACCAGCGCCGTGTGCTGGC 5469 Query 95199 CGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTG 95258 || || |||| || ||||| || || ||||||| | |||| |||| Sbjct 5468 AGGCGAGTTCCAGGTGGTCAACCCATGGCTTCTGAAGGACCTGGTGGACATGGGCCTGTG 5409 Query 95259 GGGTGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCC 95314 | ||||| | ||||||| | ||| | | ||| || ||||||||||||| Sbjct 5408 GTCGGACAACATGAAGAACCGCATCATTGCAGAGGG----CGGGTCGGTCCAGAACATCC 5353 Query 95315 CGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCG 95374 || | || |||| || ||||||||||| |||||||| |||||||||||| |||||||| Sbjct 5352 CGAACATCCCGGCTGAAATCAAGGCGCTGTACAAGACAGTGTGGGAGATCTCGCAGCGCA 5293 Query 95375 TGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 ||| | | ||||||| ||| || | |||||| |||| Sbjct 5292 CGATTGTGCAGATGGCGGCCGACCGTGGCGCGTTCATCGACCAG 5249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717609627840