Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq376 250 2e-61
seq1 140 3e-28
seq233 100 3e-16
>seq376
Length=8930
Score = 250 bits (276), Expect = 2e-61
Identities = 940/1454 (65%), Gaps = 59/1454 (4%)
Strand=Plus/Plus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
|||||||||| || |||||||| |||| ||| || | | || | ||| ||| | |
Sbjct 5446 GGTTGACCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATG 5505
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| ||||||| ||||| || || || | || | ||| |||||||| |||||
Sbjct 5506 GCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCA 5565
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
|||||| | || |||| ||||||| | || | | || || | ||| ||||
Sbjct 5566 CCAACAGACTGTTGCGCACGCCGTGCTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCC 5625
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT--CGACTGGCGGG 153265
|||| ||| ||| | ||| |||||| || |||| | | || |||| | | |
Sbjct 5626 ACAGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAG 5685
Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAG 153325
|| || | |||| ||| ||| || | | ||||| ||||| ||| ||
Sbjct 5686 AC--CCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAG 5743
Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385
||| | | ||| || || || ||| || || ||||| | ||| || |||
Sbjct 5744 CGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCGACTC 5803
Query 153386 GTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGG 153445
| ||||| |||||| || || || || |||| ||||||| ||| || ||||| ||
Sbjct 5804 AAAAGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGG 5863
Query 153446 TCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAAT 153505
|| || | ||||||| | ||| || | || |||| ||| ||||| ||
Sbjct 5864 CCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGACGTCGATGAT 5923
Query 153506 TTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGT 153565
||| ||||||||||||||||| | || | | | | ||| |||| ||| || || ||
Sbjct 5924 ACGGTTCAGGTTGCGCACCACCACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTACGT 5983
Query 153566 CATTTCGTCGACGCGTACGCATCGATTCACGGCA-----ATAGACGCCAGATTACAGACG 153620
| |||| | ||||| | | | |||||| | |||| ||| || || ||
Sbjct 5984 C---TCGTTG--GCGTAGTCCACAAAAGACGGCAGCGCCAGCGACGACAGGTTGCACACC 6038
Query 153621 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATG 153680
||| ||| |||| ||| ||||| | ||||| | ||| |||||| || |||
Sbjct 6039 GCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAGCTGCGGATG 6098
Query 153681 ACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 153740
||||| || | ||| ||||| ||||| ||||| ||| ||| | |||||| ||||
Sbjct 6099 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGG 6158
Query 153741 CCGCCGGTCTCGACTTGCGTTTC---GACGATAAACCTATGCAGGTCCTGCGCTCGCACC 153797
||||||||| |||| || |||| | ||| ||| | ||| || |||
Sbjct 6159 TTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCA---CAGCTTCTGGGCCTTGACC 6215
Query 153798 CGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCG 153857
| || |||||||| ||||||| |||||||| ||| ||||||||||||
Sbjct 6216 GTGCGACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACTCGTCGCCG 6275
Query 153858 TAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCG 153917
||||||||||| || || || |||| || || |||||||||| ||| |||| ||
Sbjct 6276 TAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCA------GTCGCCG 6329
Query 153918 TT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGC 153971
|| || || ||||||||| ||||| | ||||||||| | ||||||||
Sbjct 6330 TTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCGG 6389
Query 153972 GC-CTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGA-GCACGCTATAGATG 154025
|| | | | |||||| | ||||| ||||| ||| | || | || | | | | |
Sbjct 6390 GCGCGTAC-CTCCTCCTTG-CCATGGTTCTTGCG---CAGGTCGAGGAACTCGA-ACACG 6443
Query 154026 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGA 154082
|| || ||||| || || | ||||| | | ||| ||| ||| ||||| |||||
Sbjct 6444 TCAGCATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGG 6503
Query 154083 TCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTG 154142
|| || | ||| || | |||||||| ||||||| ||| || | | |||| | | ||
Sbjct 6504 TCCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTA 6563
Query 154143 CCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCC 154198
|||||||| || ||| || ||| |||||| | | || ||||| | ||
Sbjct 6564 CCGTTGGTGCCGGCAATGTAT----GAGCCAGTGGCGCGGATGCGGTGGACGTTCATCCC 6619
Query 154199 AATGCC-GCCGCCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCG 154256
||||| ||||||| ||| || || ||||| |||| || || |||||||||
Sbjct 6620 GATGCCACCCGCCGT-CTTGGAGATCATAGCGCAAGTC-TTGAGGGTGTCGTAGATGCCC 6677
Query 154257 TCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTT 154316
|| ||||| || || | | | | || ||| ||||| | || | | ||||
Sbjct 6678 TCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTG 6737
Query 154317 CCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTAC 154376
|| || || || ||||| |||||| || || | || | | ||| | ||||
Sbjct 6738 CCAGCGTTGAAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAC 6797
Query 154377 GTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATG 154436
|| || | | || || | | ||||| || |||| ||| |||||||||| ||||
Sbjct 6798 GTCTCCAGGACGCGCTCCACGTTGTCGCCCCAGATCCCGACCGCCACGCGCATGATCATG 6857
Query 154437 TGCTGCGGACGTTC 154450
||||| || || ||
Sbjct 6858 TGCTGGGGCCGCTC 6871
>seq1
Length=398088
Score = 140 bits (154), Expect = 3e-28
Identities = 306/455 (67%), Gaps = 29/455 (6%)
Strand=Plus/Plus
Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCG-CC 52454
|||| |||| || ||||| ||||||||| | || || |||| ||||| || ||
Sbjct 36649 AGCGTCTGGTCGCATTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGC-GCTTTCTCGTCC 36707
Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATA 52514
||||| | | || | | ||| | |||||||||||||| ||| ||||||| ||||
Sbjct 36708 ATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATC 36767
Query 52515 TCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC---TACTAC------AAGACG 52565
||||| ||||| || |||||||| ||||| || ||||| | || | ||||
Sbjct 36768 TCGCGTGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTGTTCTCCCATCTGAAGAAC 36827
Query 52566 CGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625
||| | | | || | | ||||| ||| | || || ||
Sbjct 36828 CGCCCCAGCAAGAAGGTTATTGAGGACATCATCGTC------------GATGCCGTCAAG 36875
Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685
||||| ||||||| | || | || ||||| || ||||||||||||||| || |
Sbjct 36876 ATCGAGCAGGAGTTCCTCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACTCGACG 36935
Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCC 52744
|||| ||||||| ||||||||||| ||||| ||| |||| ||||| | | |
Sbjct 36936 CTCATGAAGCAGTACATTGAGTTTGTGGCCGATCGCCTGCTGGTTTCTCTCGGCAACGAC 36995
Query 52745 AAAGTACTTCAACGCTCG--CAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGC 52802
|| || | |||||| ||| || ||||| || ||| | ||||| || || | |||
Sbjct 36996 AAGGTGT---ACCGCTCGAGCAACCCCTTTGACTTCATGGAGAACATCTCCCTGGGCGGC 37052
Query 52803 AAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||||||||| || |||||||| |||||||| ||
Sbjct 37053 AAGACCAACTTCTTTGAGAAGCGTGTCGGCGACTA 37087
>seq233
Length=18884
Score = 100 bits (110), Expect = 3e-16
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||||||| || || |||||| || || || || | |
Sbjct 1838 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCCAGCTGCTTGCCCGCA 1897
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || ||||| |||||||| || || || || || || ||| | || | || |
Sbjct 1898 AAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTATC-CTGAATCTTCGACTTGAC 1956
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | |||||||||||| | || | ||| || || || || || |
Sbjct 1957 GTTG-TCGATCGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTGCCGGTGAGCGTCT 2015
Query 138599 TTACAAAAATCTGCAT 138614
| || || || |||||
Sbjct 2016 TGACGAAGATTTGCAT 2031
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/197 (72%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||||||| || || ||||| || || || || | |
Sbjct 2066 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCCAGCTGCTTGCCCGCA 2125
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || ||||| |||||||| || || || || ||||| ||| | || | || |
Sbjct 2126 AAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC-CTGAATCTTCGACTTGAC 2184
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | |||||||||||| | || | ||| || || || || || |
Sbjct 2185 GTTG-TCGATCGTGTCCGACGACTCCACCTCCAGGGTGATCGTCTTGCCGGTGAGCGTCT 2243
Query 138599 TTACAAAAATCTGCATG 138615
| || || || ||||||
Sbjct 2244 TGACGAAGATTTGCATG 2260
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || ||||||||||| || || ||| |||||| || || || || | | |
Sbjct 1384 CTCCTTCTGGATGTTGTAGTCCGACAGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAA 1443
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542
||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 1444 GATCAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 1503
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | |||||| | ||||||||||| ||| | ||| || || ||||| || || ||
Sbjct 1504 GTCAATCGTGTCGCTGCTCTCCACCTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGAC 1563
Query 138603 AAAAATCTGCATG 138615
|| |||||||||
Sbjct 1564 GAAGATCTGCATG 1576
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| ||||||||||||||| || || ||| ||||| || || || || | |
Sbjct 1612 CTCCTTCTGAATGTTGTAGTCGGACAGCGTCCGCCCATCCTCCAGCTGCTTGCCCGCGAA 1671
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542
|| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 1672 AATCAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 1731
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | |||||| | ||||||||||| ||| | ||| || || ||||| || || ||
Sbjct 1732 GTCGATCGTGTCGCTGCTCTCCACCTCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGAC 1791
Query 138603 AAAAATCTGCATG 138615
||| |||||||||
Sbjct 1792 AAAGATCTGCATG 1804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256792234880
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