Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq722 343 2e-89 seq555 109 7e-19 >seq722 Length=76843 Score = 343 bits (380), Expect = 2e-89 Identities = 721/1066 (68%), Gaps = 14/1066 (1%) Strand=Plus/Minus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||||| || || || | || ||||| ||||| ||||| |||||||| |||| || || Sbjct 6209 GATGGCAGCCTGCACAGCAGCGCCGTAGGCGACGGCCTCGTCGGGGTTGATCGACTTGTT 6150 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 | || || ||||| || || |||| | || | || || |||||| || || || Sbjct 6149 GGGCTCCTTGCCGTTGAAGTAGTCCGTGATCAGCTTCTGGATACGCGGGATACGCGTGGA 6090 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 || ||||||| || || || | ||| | || || |||||||| | ||| || Sbjct 6089 GCCGCCGACCAGGACAATCTCGTGCACCTGAGACTTGTCGATCTTCGCGTCCGTCAGGAC 6030 Query 7201 TTTTTCGACAGGTTCCATACATTTAC-GGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259 || || || | || | | || |||||| |||| ||||| ||||| || || | Sbjct 6029 ACGGTCAACCGGCTGCAG-CGTAGACCGGAACAGGTCCTGGCACAGCTCCTCGAAGCGGG 5971 Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 ||||||| ||||| || ||||| || | ||| ||||| | || || || || || | | Sbjct 5970 CACGGGTGATGGAAGTGTAGAAGTCGATGCCCTCGTAGAGGGAGTCGATCTCGATCGAGG 5911 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 | || |||| ||| || | || ||||| || ||||| || || || || | || || | Sbjct 5910 TCTGAGCCGACGACGACAGTGTGCGCTTGGCACGCTCGCAGGCAGTGCGCAGGCGGCGCA 5851 Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439 | ||||| | ||| || | || ||||| | || || || ||||| | ||||| Sbjct 5850 GAGCACGGGCGTTGGACGACAGGTCCTTCTTGTACTTGCGCTTGAACTCCTGGACGAAGT 5791 Query 7440 G-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496 | | || ||| | | || || || |||||||||||||| || || || ||||| | Sbjct 5790 GGTTGACCAGGCGGTTG---TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGG 5734 Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556 ||||| || |||||||| | ||||| | | || ||| ||||| || || || |||| Sbjct 5733 ACTTGACCTCGAAGATACCCTCCTCAATCGTCAGCAGCGACACATCGAAGGTGCCGCCAC 5674 Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGA 7616 ||||||| || || || ||||| ||| | || ||||| || || ||||| |||| Sbjct 5673 CCAGGTCGAAGATCAGCACGTTGCGCTCGCCCTCAACCTTCTTGTCCAGGCCGTAGGCGA 5614 Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 | || || ||||| || || || || || || || ||||||||| || || | | Sbjct 5613 TGGCAGCGGCCGTGGGCTCGTTGATGATCCGCAGCACGTTCAGGCCGGCGATCAGACCAG 5554 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 | || || || || || || || || ||||| |||||||||||||| || ||||| |||| Sbjct 5553 CGTCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCCGGGACGGTGACGACAGCGT 5494 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 | || | || || |||| || || | || ||| || | || ||||| | Sbjct 5493 TGTTAACGGTGCCGCCCAGGTACGCCTCAGCAGTCTCGCGCATCTTTATCAGCACCATGG 5434 Query 7797 ATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGG 7856 | |||||||| || | | ||||| || || || || || || || || || || | || Sbjct 5433 AGGAAATCTCCTCGGGTGTGAACTGCTTGGTCTCGCCCTTGAACTCGACCTCGATGACGG 5374 Query 7857 GTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT 7916 | || |||| ||| || || ||| | | | | ||||| ||| | ||||||| Sbjct 5373 GCTT-GCCGC--CACGCTCGACAATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCT 5317 Query 7917 GTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGT 7976 |||| | |||||| | ||||| |||||||| || || ||||| ||||| |||| Sbjct 5316 CCGGGTCGGCAAACTTCCGGCCGATCAGACGCTTGGCGTCGAAAACGGTGTTGGCAGGGT 5257 Query 7977 TCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACG 8036 ||||||| |||||||| || || || ||||| | || || | ||||| || | Sbjct 5256 TCATGGCCACCTGGTTCTTGGCGGCATCACCGATCAACCGCTC---CGTGTCCGTGAAGG 5200 Query 8037 CGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082 | ||| | || || || || || || || ||||| || ||||| || Sbjct 5199 CCACGAAAGACGGCGTAGTGCGGTTACCCTGGTCATTTGCAATGAT 5154 >seq555 Length=206003 Score = 109 bits (120), Expect = 7e-19 Identities = 200/288 (69%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||| | || || || || || || || ||| || |||| ||| Sbjct 85656 TCGAAGTCCTCGCCACCAAGATGCGTGTCACCTGCAGTAGCCAGGACCTCGAAGACACCC 85597 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || ||||| || ||||| || || ||||| | | || | Sbjct 85596 TCATCGATTGAGAGGAGAGAGACATCGAAGGTACCGCCGCCAAGGTCGTAGACGATGATC 85537 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | || ||| | ||| |||| || |||||||| ||||| || || || || || || Sbjct 85536 T--GGCTC-TCGCCCTTGGTCTTGTCCAGACCGTAGGCGATGGCGGCTGCAGTGGGCTCG 85480 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | |||||| || ||| |||||||||||||| || | ||||| || ||||| || || Sbjct 85479 TTGACAATACGGAGGACA-TTCAGGCCAGCAATGGTGCCGGCATCCTTGGTCGCCTGGCG 85421 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 || ||||| |||||||| || || || ||||| |||| ||||| Sbjct 85420 CTGGTTGTCGTTGAAGTAGGCGGGCACAGTGACGACAGCGTGTGTGAC 85373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125622999360