Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq722 343 2e-89
seq555 109 7e-19
>seq722
Length=76843
Score = 343 bits (380), Expect = 2e-89
Identities = 721/1066 (68%), Gaps = 14/1066 (1%)
Strand=Plus/Minus
Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080
|||||| || || || | || ||||| ||||| ||||| |||||||| |||| || ||
Sbjct 6209 GATGGCAGCCTGCACAGCAGCGCCGTAGGCGACGGCCTCGTCGGGGTTGATCGACTTGTT 6150
Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140
| || || ||||| || || |||| | || | || || |||||| || || ||
Sbjct 6149 GGGCTCCTTGCCGTTGAAGTAGTCCGTGATCAGCTTCTGGATACGCGGGATACGCGTGGA 6090
Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200
|| ||||||| || || || | ||| | || || |||||||| | ||| ||
Sbjct 6089 GCCGCCGACCAGGACAATCTCGTGCACCTGAGACTTGTCGATCTTCGCGTCCGTCAGGAC 6030
Query 7201 TTTTTCGACAGGTTCCATACATTTAC-GGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259
|| || || | || | | || |||||| |||| ||||| ||||| || || |
Sbjct 6029 ACGGTCAACCGGCTGCAG-CGTAGACCGGAACAGGTCCTGGCACAGCTCCTCGAAGCGGG 5971
Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319
||||||| ||||| || ||||| || | ||| ||||| | || || || || || | |
Sbjct 5970 CACGGGTGATGGAAGTGTAGAAGTCGATGCCCTCGTAGAGGGAGTCGATCTCGATCGAGG 5911
Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379
| || |||| ||| || | || ||||| || ||||| || || || || | || || |
Sbjct 5910 TCTGAGCCGACGACGACAGTGTGCGCTTGGCACGCTCGCAGGCAGTGCGCAGGCGGCGCA 5851
Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439
| ||||| | ||| || | || ||||| | || || || ||||| | |||||
Sbjct 5850 GAGCACGGGCGTTGGACGACAGGTCCTTCTTGTACTTGCGCTTGAACTCCTGGACGAAGT 5791
Query 7440 G-TCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496
| | || ||| | | || || || |||||||||||||| || || || ||||| |
Sbjct 5790 GGTTGACCAGGCGGTTG---TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGG 5734
Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556
||||| || |||||||| | ||||| | | || ||| ||||| || || || ||||
Sbjct 5733 ACTTGACCTCGAAGATACCCTCCTCAATCGTCAGCAGCGACACATCGAAGGTGCCGCCAC 5674
Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGA 7616
||||||| || || || ||||| ||| | || ||||| || || ||||| ||||
Sbjct 5673 CCAGGTCGAAGATCAGCACGTTGCGCTCGCCCTCAACCTTCTTGTCCAGGCCGTAGGCGA 5614
Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676
| || || ||||| || || || || || || || ||||||||| || || | |
Sbjct 5613 TGGCAGCGGCCGTGGGCTCGTTGATGATCCGCAGCACGTTCAGGCCGGCGATCAGACCAG 5554
Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736
| || || || || || || || || ||||| |||||||||||||| || ||||| ||||
Sbjct 5553 CGTCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCCGGGACGGTGACGACAGCGT 5494
Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796
| || | || || |||| || || | || ||| || | || ||||| |
Sbjct 5493 TGTTAACGGTGCCGCCCAGGTACGCCTCAGCAGTCTCGCGCATCTTTATCAGCACCATGG 5434
Query 7797 ATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGG 7856
| |||||||| || | | ||||| || || || || || || || || || || | ||
Sbjct 5433 AGGAAATCTCCTCGGGTGTGAACTGCTTGGTCTCGCCCTTGAACTCGACCTCGATGACGG 5374
Query 7857 GTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCT 7916
| || |||| ||| || || ||| | | | | ||||| ||| | |||||||
Sbjct 5373 GCTT-GCCGC--CACGCTCGACAATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCT 5317
Query 7917 GTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGT 7976
|||| | |||||| | ||||| |||||||| || || ||||| ||||| ||||
Sbjct 5316 CCGGGTCGGCAAACTTCCGGCCGATCAGACGCTTGGCGTCGAAAACGGTGTTGGCAGGGT 5257
Query 7977 TCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACG 8036
||||||| |||||||| || || || ||||| | || || | ||||| || |
Sbjct 5256 TCATGGCCACCTGGTTCTTGGCGGCATCACCGATCAACCGCTC---CGTGTCCGTGAAGG 5200
Query 8037 CGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAAT 8082
| ||| | || || || || || || || ||||| || ||||| ||
Sbjct 5199 CCACGAAAGACGGCGTAGTGCGGTTACCCTGGTCATTTGCAATGAT 5154
>seq555
Length=206003
Score = 109 bits (120), Expect = 7e-19
Identities = 200/288 (69%), Gaps = 5/288 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || ||||| | || || || || || || || ||| || |||| |||
Sbjct 85656 TCGAAGTCCTCGCCACCAAGATGCGTGTCACCTGCAGTAGCCAGGACCTCGAAGACACCC 85597
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | || ||||| || ||||| || || ||||| | | || |
Sbjct 85596 TCATCGATTGAGAGGAGAGAGACATCGAAGGTACCGCCGCCAAGGTCGTAGACGATGATC 85537
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| | || ||| | ||| |||| || |||||||| ||||| || || || || || ||
Sbjct 85536 T--GGCTC-TCGCCCTTGGTCTTGTCCAGACCGTAGGCGATGGCGGCTGCAGTGGGCTCG 85480
Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | |||||| || ||| |||||||||||||| || | ||||| || ||||| || ||
Sbjct 85479 TTGACAATACGGAGGACA-TTCAGGCCAGCAATGGTGCCGGCATCCTTGGTCGCCTGGCG 85421
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743
|| ||||| |||||||| || || || ||||| |||| |||||
Sbjct 85420 CTGGTTGTCGTTGAAGTAGGCGGGCACAGTGACGACAGCGTGTGTGAC 85373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635125622999360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |