Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq376 190 3e-43
seq1 98.7 1e-15
>seq376
Length=8930
Score = 190 bits (210), Expect = 3e-43
Identities = 1004/1587 (63%), Gaps = 51/1587 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||||| || ||| |||| ||| || || | | || ||
Sbjct 6865 CCCCAGCACATGATCATGCGCGTGGCGGTCGGGATCTGGGGCGACAACGTGGAGCGCGTC 6806
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
||||||| ||| || | |||||| | |||| ||||| | || || || |||
Sbjct 6805 CTGGAGACGTACAACTACATGTCCAACAAGTTCTTCACACACGCGTCGCCCACGCTTTTC 6746
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
|||||||| || || | |||| | | || ||||| ||| | ||||| ||
Sbjct 6745 AACGCTGGCACGCCCCAAGCCCAGCTCGCGTCGTGCTTCCTGGTTGACATGAAGGATGAC 6686
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGGGCTG 111849
|| | ||||| |||| ||| |||| || | ||| | | ||||| ||| ||| |
Sbjct 6685 AGCATTGAGGGCATCTACGACACCCTCA-AGACT-TGCGCTATGATCTCCAAGACGGCGG 6628
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTAC 111907
|||| ||||||||| || |||| || | |||| | ||| | ||| || ||
Sbjct 6627 GTGGCATCGGGATGAACGTCCACCGCATCCGCGCCA--CTGGCTCATACATTGCCGGCAC 6570
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| ||| ||| | || ||| | || ||||| ||||| || ||| ||| || |||||
Sbjct 6569 CAACGGTACATCCAACGGCATTGTCCCTATGCTGCGCGTGTTCAACAACACGGCCCGCTA 6510
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
||| |||| | ||| ||| || ||| || ||| |||| || ||||| ||
Sbjct 6509 TGTGGACCAGGGTGGAAACAAGCG--GCCAGGCGCCTTCTGCA-TCTACCTGGAGCCGTG 6453
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081
||| || || | | |||||||| || |||| ||||| || | ||||||| ||
Sbjct 6452 GCATGCTGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCATGGCAAGGAGGAGGTACG 6393
Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
|||||| || ||| || |||||||| || || || ||||||||| | || ||| |
Sbjct 6392 CGCCCGCGACCTGTTCCTGGCGCTCTGGATCCCGGACCTGTTCATGAAGCGTGTGGAGAA 6333
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
|| ||| | ||| | || | || || | || || ||||| |||| | ||
Sbjct 6332 GAACGGCGACTGGACGCTGATGTGCCCCAATGAGTGCCCGGGTCTGGCCGACTGCTACGG 6273
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGG 112260
|| ||||| || ||| | ||| ||||||||| | || | || ||| || ||||
Sbjct 6272 CGACGAGTTCGAGGCCTTGTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGTCGC-ACGG 6214
Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319
| | || | || | ||||| | || | || || | || || ||||| || | ||
Sbjct 6213 T-CAAGGCCCAGAAGCTGTGGTATGCCGTCCTGGAGGCGCAGACGGAGACCGGCAACCCG 6155
Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379
| ||||| ||||| ||| ||| |||| ||||| || || ||||| |||| |||
Sbjct 6154 TTCATGCTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATC 6095
Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439
|| |||||||| || ||||| || | || | | |||||| ||| |||
Sbjct 6094 CGCAGCTCCAACCTGTGCACAGAGATTATCGAGTACTGCGCGCCCGATGAGGTGGCGGTG 6035
Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACATTTG 112497
|| ||||| | || | || || || | |||||| | | ||| |||| | |
Sbjct 6034 TGCAACCTGTCGTCGCTGGCGCTGCCGTCTTTTGTGGA--CTACGCCAACGAGACGTACG 5977
Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557
| | | || || ||||| || ||| | || ||||| ||| | | || |
Sbjct 5976 ACTTCCAGAAGCTTCACGAGGTCACGCAGGTGGTGGTGCGCAACCTGAACCGTATCATCG 5917
Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617
| || | ||||| || | || || || || ||| | ||||| || || |
Sbjct 5916 ACGTCAACTACTACCCTGTGCCGGAGGCGCGCAACAGCAACATGCGTCACCGGCCGATCG 5857
Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-----CATTTGA 112672
|| | |||||||| || | ||||||| ||| || ||| || | |||||
Sbjct 5856 GTGTGGGTGTCCAGGGCTTGGCGGATGCGTTC-----CTGGCGCTGCGGATGCCTTTTGA 5802
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
|| || ||| || |||| || || |||||||| || || ||||| || ||
Sbjct 5801 GTCGCCGGAGGCGCGTGAGCTCAACAAGCAGATCTTTGAGACGATCTACCACGCTGCGCT 5742
Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
|||| | || |||| || | || || || || | ||||| |||||
Sbjct 5741 GACGGCGTCATGCGACCTGGCGAAGCTGGAGGGCGTGTACTCGACGTACGAGGGGTCTCC 5682
Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 112852
| || || || | || || |||||||||||||| | || | | | | | ||
Sbjct 5681 CGTGTCGCAGGGCATCCTGCAGTTTGATATGTGGGACGTCAAGCCGACGGACCTGTGGGA 5622
Query 112853 CTGGGACGC------TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 112906
||||||| | ||||||| ||||||||| | || | || |||||||| ||
Sbjct 5621 CTGGGACTCGCTGCGTCTCAAG------ATCAAGGAGCACGGCGTGCGCAACAGTCTGTT 5568
Query 112907 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 112966
| |||| || ||||| || || || ||| | || ||| |||| || || |||||||| ||
Sbjct 5567 GGTGGCGCCGATGCCGACGGCATCGACCTCGCAGATCCTGGGCAACAACGAATGCTTCGA 5508
Query 112967 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026
|| |||||| | |||||||| | | | | || || || ||||| | | |||||
Sbjct 5507 GCCATACACGTCCAACATCTACCAGCGCCGTGTGCTGGCAGGCGAGTTCCAGGTGGTCAA 5448
Query 113027 CAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 113084
| ||| || || | ||||| || || || || ||||| | | |||||| |
Sbjct 5447 C--CCATGGCTTCTGAAGGACCTGGTGGACATGGGCCTGTGGTCGGACAACATGAAGAAC 5390
Query 113085 CTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAG 113144
| ||| | || ||| || || | || || || | | || || | |||||| |||
Sbjct 5389 CGCATCATTGCAGAGGGCGGGTCGGTCCAGAACATCCCGAACATCCCGGCTGAAATCAAG 5330
Query 113145 AAGTTGTACCGCACAGTTTGGGAAATC 113171
| ||||| ||||| ||||| |||
Sbjct 5329 GCGCTGTACAAGACAGTGTGGGAGATC 5303
>seq1
Length=398088
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231
||||||| |||| || ||||||| || || ||||| ||||||||| || | |
Sbjct 36640 CCTTTGCGCAGCGTCTGGTCGCATTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCTT 36699
Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291
||| | || | ||||| |||||||| || || ||||| || || |||||||||||
Sbjct 36700 TCTCGTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCCGGCCTGACCTTCTCCAACG 36759
Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||| ||||| ||||||||||| || |||
Sbjct 36760 AGCTGATCTCGCGTGACGAGGGCCTGCAC 36788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620735385610880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |