Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq376 183 4e-41
seq444 95.1 1e-14
>seq376
Length=8930
Score = 183 bits (202), Expect = 4e-41
Identities = 1021/1606 (64%), Gaps = 65/1606 (4%)
Strand=Plus/Plus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556
||| | |||||| ||||| |||||||| ||||| || |||||||| | | || |
Sbjct 5234 GTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTGCACAATCGT 5293
Query 109557 ACACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615
| || || | || ||||| || |||||||||| |||||| ||| | || ||||
Sbjct 5294 GCGCT----GCGAGATCTCCCACACTGTCTTGTACAGCGCCTTGATTTCAGCCGGGATGT 5349
Query 109616 CCACGATGTTTTGAATAGAGCCACCAGCCTTCACCA----TGAGATCCTTCATCTCTTTC 109671
| |||||| || || | ||| ||| || || || | | |||||| | | |
Sbjct 5350 TCGGGATGTTCTG----GACCGACCCGCCCTCTGCAATGATGCGGTTCTTCATGTTGTCC 5405
Query 109672 GACCAGAGACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATT 109729
||||| || || | | || || | | ||| ||| ||||||||| || |
Sbjct 5406 GACCACAGGCCCATGTCCACCAGGTCCTTCAGAAGCCATGG--GTTGACCACCTGGAACT 5463
Query 109730 CACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGT 109789
| || || || || || |||||||||| | |||||| || ||||| || || ||||
Sbjct 5464 CGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGT 5523
Query 109790 TGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGA 109849
|||| ||||| || | || || || || ||||| || |||| | |||||||| || |
Sbjct 5524 TGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACCAACAGACTGTTGCGCA 5583
Query 109850 GACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATA-ACGACCACTAAATTTA 109908
|| | | ||| | | ||||| | |||||| || | | | || |
Sbjct 5584 CGCCGTGCTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCCACAGGTCCG-------TC 5636
Query 109909 GTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAA 109968
| || | ||||||||||| || || | |||| | | ||||| |||| | |
Sbjct 5637 GGCTTGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAGACCCCTCGTAC 5696
Query 109969 CTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATAC 110028
|| |||| ||||| | || |||| ||| |||| ||| || || || || ||
Sbjct 5697 GTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAGCGCAGCGTGGTAG 5756
Query 110029 ATAGTCTCAAAAATATGAGCATTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGA 110085
|| |||||||| || || || |||| || | ||| | || || || |
Sbjct 5757 ATCGTCTCAAAGATCTGC---TTGTTGAGCTCACGCGCCTCCGGCGACTCAAAAGGCAT- 5812
Query 110086 CCACAAAGA-ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTT 110144
|| || | | ||| ||||||| | ||||| ||||| | ||| || || || ||
Sbjct 5813 CCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGGCCGGTGACG 5872
Query 110145 CATGTTAGAGC-GTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGATGACCCGATT 110201
|||||| || || | || | | || ||||| ||||| |||||||| || ||
Sbjct 5873 CATGTT---GCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGACGTCGATGATACGGTT 5929
Query 110202 GAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGT 110261
|| || | ||| || ||||| || || || || | | | ||| |||| | |||
Sbjct 5930 CAGGTTGCGCACCACCACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTACGTCT-CGT 5988
Query 110262 CTCCTTATTG-ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGT 110320
| || | ||| | || || || | |||| || |||||||| | ||| |
Sbjct 5989 TGGCGTAGTCCACAAAAGACGGCAGCGCCAGCGACGACAGGTTGCACACCGCCACCTCAT 6048
Query 110321 CTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGT 110380
| || ||| || | ||| || || |||| |||||| || ||| |||| ||
Sbjct 6049 CGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGT 6108
Query 110381 TCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTT 110440
||||||| || ||| |||||| ||||| || |||||| | ||| | || || |
Sbjct 6109 TCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCGGTCT 6168
Query 110441 CCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCG 110499
||||||| | || || | ||| | ||| | | || | ||| ||| || ||| ||
Sbjct 6169 CCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTG-GGCCTTGACCGT-GCGACGGCC 6226
Query 110500 A-GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558
| | || |||| ||||||||| ||||||| |||| || || | ||||| || |
Sbjct 6227 ACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACTCGTCGCCGTAGCAGTCGGC 6286
Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618
|||||| || | ||| || | || | ||| | || || ||| || | |||
Sbjct 6287 CAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGCCGTTCTTCTCCACACGCTT 6346
Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATC 110678
|||||||||||| || ||||| | |||| ||| ||||| ||| || |||| || |
Sbjct 6347 CATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCGGGCGCGTACCTCCTCCTT 6406
Query 110679 ACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738
|| ||||| ||| || || | || || | | || | ||||| || || || ||
Sbjct 6407 GCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCAGCATGCCACGGCTCCAGGTA 6466
Query 110739 GA--CA----GCGATGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGC 110792
|| || ||| | | ||| | || |||||| |||||||| || |||
Sbjct 6467 GATGCAGAAGGCGCCTGGCCGCTTGTTTCCAC---CCTGGTCCACATAGCGGGCCGTGTT 6523
Query 110793 ATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCT 110852
||||| || | |||||||| | ||| || | |||| ||| || || || |||
Sbjct 6524 GTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTACCGTTGGTGCCGGCAATGTA 6583
Query 110853 GGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAAT 110912
|| | |||| || ||| ||||| | ||| || || ||||||||| ||| ||
Sbjct 6584 TGAGCCAGTGGCGCGGATGCGGTGGACGTTCATCCCGATGCCACCCGCCGTCTTGGAGAT 6643
Query 110913 --TTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCA 110970
| | ||| | ||| |||| || | || || || ||||| || |||| || ||
Sbjct 6644 CATAGCGCA-AGTCT-TGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCATGTCA 6701
Query 110971 ATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTC 111030
| || ||||| || | | ||| | | ||||| || || ||||| || || || | |
Sbjct 6702 ACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAGCGTTGAAAAGCGTGGGCGAC 6761
Query 111031 GCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074
|| || ||| ||| |||| |||||| | |||||| || || ||
Sbjct 6762 GCGTGTGTGA--AGAACTTGTTGGACATGTAGTTGTACGTCTCCAG 6805
>seq444
Length=208719
Score = 95.1 bits (104), Expect = 1e-14
Identities = 250/375 (67%), Gaps = 14/375 (4%)
Strand=Plus/Minus
Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647
||| ||| |||||||| || || || | |||||| | |||| || ||||| ||||||
Sbjct 204437 TGTTGAAGCCGTCCATCTCCGTCAGGATCTGGTTCAGCGTCGCCTCGCGCTCGTCGTTGC 204378
Query 11648 AGG----GCATACCA---CCT-GCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGAT 11699
| || | | ||| |||| ||| | |||| ||||| ||||| |||||
Sbjct 204377 CGCCCGAGCTGAACTTGCCCTCGCCG--CGCGACCGGCCGATCGCGTCGATCTCGTCGAT 204320
Query 11700 GAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGC 11759
||| | ||| ||||| | || ||| | || || || || || ||| |||
Sbjct 204319 GAAAATGATGCACGGCGCACTCTTGCGCGCCGTCGCAAACAGATCGCGCACCCGCGACGC 204260
Query 11760 TCCAACACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACA 11817
|| || || || |||||||| || || | | | || || | ||||| ||| || ||
Sbjct 204259 GCCCACGCCCACAAACATCTCCACAAACTCCGACCCGCTGA-CGCTGAA-GAACGGCACC 204202
Query 11818 TTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCG 11877
||||| || || |||| || || || ||||| |||||||| |||| || ||
Sbjct 204201 CCCGACTCGCCGGCCGTGGCCTTGGCCAGCAGCGTCTTGCCCGTACCCGGTGGCCCGGCC 204142
Query 11878 AGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGG 11937
|| | ||||| || |||||||||||||| | | ||||||| |||| ||| |||
Sbjct 204141 AGGATCGCGCCGCGCGGGATCTTGGCACCCAGCCGCTGGAAGCGCTCCGGCTGCTTCAGG 204082
Query 11938 AAGTCCACAATCTCC 11952
||| ||||| ||||
Sbjct 204081 AAGCTCACAAACTCC 204067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588969344571200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |