Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq376 181 1e-40
>seq376
Length=8930
Score = 181 bits (200), Expect = 1e-40
Identities = 1111/1750 (63%), Gaps = 55/1750 (3%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCA-CGCGTACATATGCATAGAAGA 105648
|| || |||||||| |||||||||||||| ||||| | |||| | |||||| |
Sbjct 5142 CGCAGGTAGTACATACCGGTCTTGAGTCCCAACTTCCAGCCCGTAAA-ATGCATGCTGGT 5200
Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATG 105706
| |||| ||| || || |||| || || | ||| |||| |||| |||
Sbjct 5201 AATCTTGCCCATAGTCGGTGCGCGCATGTGAATGTTGAGCGACTGCGACT--GGTCGATG 5258
Query 105707 AA-GCGACCACGTTGTGCCGCCATAT---CAATGACATCCTTCATCTTGATTTCCCACAC 105762
|| ||| ||||| | |||||||| | |||| | | | | | ||| ||||||||
Sbjct 5259 AACGCG-CCACGGTCGGCCGCCATCTGCACAAT--CGTGCG-CTGCGAGATCTCCCACAC 5314
Query 105763 TGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCC 105822
||| ||| || |||||| ||| | ||||| | | ||| || || | || || ||
Sbjct 5315 TGTCTTGTACAGCGCCTTGATTTCAGCCGGGATGTTCGGGATGTTCTGGACCGACCCGCC 5374
Query 105823 CGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATT 105882
| | | ||| | | |||||| | | ||||| || || || | | || || ||
Sbjct 5375 CTCTGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCCATGTCCACCAGGTCCTT 5434
Query 105883 GACGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATG 105940
| || ||| |||||| | | ||||| || || || | | | | ||||||
Sbjct 5435 CAGAAGCCATGG--GTTGACCACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATG 5492
Query 105941 TTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 106000
|| | |||||| || || |||||||| || || |||| ||| || | ||| || || ||
Sbjct 5493 TTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTC 5552
Query 106001 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGA 106060
||||| || |||| ||| |||||||| || | || | |||||||| |||||||
Sbjct 5553 GGCATCGGCGCCACCAACAGACTGTTGCGCACGCCGTGCTCCTTGAT------CTTGAGA 5606
Query 106061 A-CA-----TCCCAGTCGTAGTTGAGCTT-GGTTTCACCTTCCCACATATCAAATTGAAG 106113
|| |||||||| | | | | || || || | ||||||||||||| || ||
Sbjct 5607 CGCAGCGAGTCCCAGTCCCACAGGTCCGTCGGCTTGACGT-CCCACATATCAAACTGCAG 5665
Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGG-GCTTCAGCCA 106172
| || || ||| |||||| ||||| | ||| || || | ||||| ||||
Sbjct 5666 GATGCCCTGCGACACGGGAGACCCCTCGTACGTCGAGTACACGCCCTCCAGCTTC-GCCA 5724
Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232
|| || |||| ||| | ||||| || || || |||||||| | || | ||
Sbjct 5725 GGTCGCATGACGCCGTCAGCGCAGCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCT 5784
Query 106233 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCT 106291
| || || || ||||| | | | | ||| | | || ||||||| | ||
Sbjct 5785 CACGCGCCTCCGGCGACTCAAAAG-GCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCC 5843
Query 106292 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGA 106351
|| ||||||| ||| || || | ||| ||||| || || ||||| | || ||
Sbjct 5844 TGGACACCCACACCGATCGGCCGGTGACGCATGTTGCTGTTGCGCGCCTCCGGCACAGGG 5903
Query 106352 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 106411
|| | || ||| |||| ||||| || || || | || |||| || |||
Sbjct 5904 TAGTAGTTGACGTCGATGATACGGTTCAGGTTGCGCACCACCACCTGCGTGACCTCGTGA 5963
Query 106412 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGAT 106471
|| || | | || | || | | | | ||| | || || || | ||
Sbjct 5964 AGCTTCTGGAAGTCGTACGTCTCGTTGGCGTAGTCCACAAAAGACGGCAGCGCCAGCGAC 6023
Query 106472 GCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAG 106531
| || ||||| || ||| |||||| | |||||| | ||| ||||| |||| |
Sbjct 6024 GACAGGTTGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGG 6083
Query 106532 TTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTG 106591
||||| || || || |||| ||||| ||||| ||||| |||||| ||||||
Sbjct 6084 TTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTG 6143
Query 106592 TAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATC 106650
|| |||||| | || | || ||||||||||| | || || | || | ||||| | ||
Sbjct 6144 TACAGCATGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTC 6203
Query 106651 GGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTT 106709
| | || | || | ||| |||| || |||||| ||||||||| ||| | ||| |
Sbjct 6204 TGGGCCTTG-ACCGT-GCGACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCT 6261
Query 106710 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACC 106769
| ||||| || || ||||| ||||| || || | || || | || | ||
Sbjct 6262 CGAACTCGTCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCC 6321
Query 106770 ATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 106829
| | || || ||| || ||||||||||| ||||| || ||||| || | || |
Sbjct 6322 AGTCGCCGTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACA 6381
Query 106830 GATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGA 106889
| || | || |||| || | || ||||| || | || |||||||| | |
Sbjct 6382 GGTCGCGGGCGCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACA 6441
Query 106890 TATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAG 106943
|| || ||||| ||||| || |||| ||| || || | | ||| |||
Sbjct 6442 CGTCAGCATGCCACGGCTCCAGGTAGA-TGCAGAAGGCGCC--TGGCCGCTTGTTTCCAC 6498
Query 106944 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 107003
| || | |||||||| || ||| ||| || ||||| ||||| || | ||| || | |
Sbjct 6499 CCTGGTCCACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGG 6558
Query 107004 ATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 107063
|| ||| || || || ||| || | |||| | | |||| || |||||
Sbjct 6559 ATGTACCGTTGGTGCCGGCAATGTATGAGCCAGTGGCGCGGATGCGGTGGACGTTCATCC 6618
Query 107064 CAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121
| || || || ||| ||| ||||| | ||||| | | | | || || | ||||| ||
Sbjct 6619 CGATGCCACCCGCCGTCTTGGAGATCATAGCGCA-AGT-CTTGAGGGTGTCGTAGATGCC 6676
Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181
| || ||| ||||| || | | |||||||| | | ||| | | || ||
Sbjct 6677 CTCAATGCTGTCATCCTTCATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGT 6736
Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 107240
||||| ||||| || || || | ||||| |||| | || | | |||||| | || ||
Sbjct 6737 GCCAGCGTTGAAAAGCGTGGGCGACGCGTGTGTGAAGA-ACTTGTTGGACATGTAGTTGT 6795
Query 107241 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACA 107300
| ||||||| ||| || | || || || ||| |||| ||||| ||||| | ||
Sbjct 6796 ACGTCTCCAGGACGCGCTCCACGTTGTCGCCCCAGATCCCGACCGCCACGCGCATGATCA 6855
Query 107301 TGTATTGGGG 107310
||| |||||
Sbjct 6856 TGTGCTGGGG 6865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589974133216960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |