Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_015210.1 Length=61440 Score E Sequences producing significant alignments: (Bits) Value seq589 91.5 6e-14 >seq589 Length=84341 Score = 91.5 bits (100), Expect = 6e-14 Identities = 121/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 45402 CAGGTCGAGCACCAGCGCGTCGGTCTTGCCGGGGTAGAGCCGGAGCGCGCGGCCGACCAT 45461 |||||||| || | || ||||||||||| || || || || ||||||||| ||| Sbjct 66096 CAGGTCGATGACGTGGCAGTTGGTCTTGCCGGCGTGCAGGCGCAGGCCGCGGCCGATCAT 66155 Query 45462 CTGCGTGTACAGGTTGCGTGAGCGCGTCGGCCGCGCGAGCACGACGGCGTCGCACATCGG 45521 ||| | ||||||||| ||||| || || || |||||||||||| |||| || ||| Sbjct 66156 CTGGACGAGCAGGTTGCGCGAGCGGGTGGGGCGGGCGAGCACGACGCAGTCG-ACGGCGG 66214 Query 45522 G-AAGTCCGCGCCCTCGGTGAGCAC-CTGCACGGTGACCAGGA 45562 | | ||| | ||||||||||| || | ||| | ||| ||||| Sbjct 66215 GCAGGTCGGTGCCCTCGGTGAAGACGCCGCA-GTTGAGCAGGA 66256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196484290718496