Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq376 535 8e-147
seq1 212 1e-49
>seq376
Length=8930
Score = 535 bits (592), Expect = 8e-147
Identities = 1176/1732 (68%), Gaps = 59/1732 (3%)
Strand=Plus/Plus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||| || ||||| |||||| ||||| | | | | ||| || ||||| | | ||
Sbjct 5234 GTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTGCACAATCGT 5293
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
| ||| |||| ||||||||| |||||| | | | |||| || | |||| | ||
Sbjct 5294 GCGCTGCGAGATCTCCCACACTGTCTTGTACAGCGCCTTGATTTCAGCCGGGATGTTCGG 5353
Query 212816 GATGTTCTGCACAGACCC--CCTGTGTA-TGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872
||||||||| || ||||| ||| || | || | | | | ||||| || |||
Sbjct 5354 GATGTTCTGGACCGACCCGCCCTCTGCAATGATGCGGTTCTT---CATGTTGTCCGACCA 5410
Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
|||||| || | ||||| ||| | || |||||||| | |||||| || ||||
Sbjct 5411 CAGGCCCATGTCCACCAGGTCCTTCAGAAGCCATGGGTTGACCACCTGGAACTCGCCTGC 5470
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
||||| | | |||||| | ||| || ||||| ||||||| || |||||||| |||||
Sbjct 5471 CAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAGCATTCGTTGTTGCCCAG 5530
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052
||||| | || || || ||||| || ||||||| |||||||| | ||| |||||
Sbjct 5531 GATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACCAACAGACTGTTGCGCACGCCGTG 5590
Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCC-TCGTCCT 213111
||| ||| | | || ||| |||||||||| ||||||| ||| | |
Sbjct 5591 CTCCTTGATCTTGAGACGCAGCGAGTCCCAGTCCCA---------CAGGTCCGTCGGC-T 5640
Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171
| |||| |||||| |||||||||| |||||| | |||||| |||| ||| | |
Sbjct 5641 TGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAGACCCCTCGTACGTCG 5700
Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231
|||| ||| | | ||| ||||| ||||| |||||| ||| ||||||| |||||| |
Sbjct 5701 AGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAGCGCAGCGTGGTAGATCG 5760
Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGC 213291
| ||||| |||| | ||||||||| ||||| || ||| || |||||| || ||
Sbjct 5761 TCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCGACTCAAAAGGCATCCGCA-GC 5819
Query 213292 GTT-GGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350
| ||||| |||| |||| |||||||| || | ||||| || | ||| | || |||
Sbjct 5820 GCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGGCCGGTGACGCATGTTG 5879
Query 213351 GACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409
||| | || |||| || ||||| ||||| ||||||||| ||| ||||||||
Sbjct 5880 CTGTTGCGCGC-CTCCGGCACAGGGTAGTAGTTGACGTCGATGATACGGTTCAGGTTGCG 5938
Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469
|||| | ||||| | | || | || | | | || | | ||| |
Sbjct 5939 CACCACCACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTACGTCTCGTTGGCGTAGTC 5998
Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGT 213529
|||||| ||||| || | | ||||||||| || |||||||| | | |
Sbjct 5999 CACAAAAGACGGCAGCGCCAGCGACGACAGGTTGCACACCGCCACCTCATCGGGCGCGCA 6058
Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589
|||||| || ||||| |||||||||||| || ||||||||||||||||||| |||||
Sbjct 6059 GTACTCGATAATCTCTGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTT 6118
Query 213590 TGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGG 213648
||| ||| | |||| |||||||| |||||| | ||| |||||||| ||| |
Sbjct 6119 GCTCTT-GCGGTTGCAGTGGTCCTTGTACAGCATGAACGGGTTGCCGGTCTCCGTCTGCG 6177
Query 213649 ACACCAGTATCTGGCT-CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGC 213707
| |||| | | | | ||| || | | |||||||||| || | | || || |
Sbjct 6178 CCTCCAGGA-CGGCATACCACAGCTTCTGGGCCTTGACCGTGCGACGGCCACGGCCCTCC 6236
Query 213708 GTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCC 213767
| |||||||| ||||| | | | ||| |||| ||| || | |||| |||
Sbjct 6237 TT---CTCGTACTTCTCGTACAAGGCCTCGAACTCGTCGCCGTAGCAGTCGGCCAGACCC 6293
Query 213768 GGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAA 213826
|| || ||| ||||| || ||||||| |||| | |||| || | || ||||||
Sbjct 6294 GGGCACTCATTGGGGCACATCAGCGTCCAGTCGCCGTTCTTCTCC-ACACGCTTCATGAA 6352
Query 213827 CAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGA 213886
||||||||||| ||| ||||| ||||||||| | || | ||| ||| |||
Sbjct 6353 CAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCGGGCGCGTACCTCCTCCTTGCCATG 6412
Query 213887 GTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGC 213946
||| |||||||| || || || || || | ||| || ||||||||||||| |||||||
Sbjct 6413 GTTCTTGCGCAGGTCGAGGAACTCGAACACGTCAGCATGCCACGGCTCCAGGTAGATGCA 6472
Query 213947 AAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGAT 214003
|||||||| |||| |||| || ||||||||||| | |||| ||||||| |
Sbjct 6473 GAAGGCGCCTGGCCGCTTGTTTCCACCCTGGTCCACATAGCGGGCCGTGTTGTTGAACAC 6532
Query 214004 GCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGG 214062
|||||| | || || | |||||||| ||| |||||||| || || || || ||||| |
Sbjct 6533 GCGCAGCATAGGGACAATGCCGTTGGA-TGTACCGTTGGTGCCGGCAATGTATGAGCCAG 6591
Query 214063 AGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118
||| | || ||| |||| | ||| |||||||| || ||||||||||||
Sbjct 6592 TGGCGC---GGATGC-GGTGGACGTTCATCCCGATGCCACCCGCCGTCTTGGAGATCATA 6647
Query 214119 GCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAG 214178
||||| | | | || || |||||| | ||||||||||| | | || | || |
Sbjct 6648 GCGCAAGTCTTGAGGGTGTCGTAGATGCCCTCAATGCTGTCATCCTTCATGTCAACCAGG 6707
Query 214179 AAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGG 214238
||||| || |||||||| || || ||||| ||||||||||||||| || ||
Sbjct 6708 AAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAGCGTTGAAAAGCGTGGGCGACGCGTGT 6767
Query 214239 ATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAG----GGGATGTCGTG 214294
| | |||||||| || | | |||| ||||||||||| | | | |||||
Sbjct 6768 GTGAAGAACTTGTTGGACATGTAGTTGTACGTCTCCAGGAC-GCGCTCCACGTTGTCGCC 6826
Query 214295 CTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCT---CTATGGGTC 214350
| |||| | || ||| | ||| | |||||||||||||| || | || |
Sbjct 6827 C---CAGATCCCGACCGC-CACGCGCATGATCATGTGCTGGGGCCGCTCAACGATCTTGC 6882
Query 214351 CTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402
| ||| | ||| |||||||| || |||||||| |||||||| ||||||||
Sbjct 6883 CGTTGAG---CTTAAGCAGGTACGAACGCTCCAGCGTCTTGAAGCCAAAGTA 6931
>seq1
Length=398088
Score = 212 bits (234), Expect = 1e-49
Identities = 361/517 (70%), Gaps = 11/517 (2%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | |||||||||||||| ||||| || ||| |||||||||||
Sbjct 37091 CTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 37032
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||| | | |||||| |||| ||| | ||||||
Sbjct 37031 CATGAAGTCAAAGGGGTTGCTCGAGCGGTACACCT-TGTCGTTGCCGAGAGAAACCAGCA 36973
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| |||| || || |||| ||||| | |||||| || ||||||||| | ||||
Sbjct 36972 GGCGATCGGCCACAAACTCAATGTACTGCTTCATGAGCGTCGAGTTCATGCCCAGCAGGG 36913
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||||| ||||| ||||| ||||||| ||| |||| ||||| || | | || |
Sbjct 36912 CGCAGGGCAGAGCCTCGGTGAGGAACTCCTGCTCGATCTTGACGGCATCGACGATGATGT 36853
Query 48078 GCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134
|| || || ||| || | || || ||| || || | |||| |||||
Sbjct 36852 CCTCAATAACCTTCTTGCTGGGGCGGTTCTT---CAGATG---GGAGAACAGCAGGCAGG 36799
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
| ||||| |||||| ||| ||||| || ||| ||| ||||||||||| || || |
Sbjct 36798 CGAAGTCGGTGTGCAGGCCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCGG 36739
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | || || |||||||| || | || ||||| ||| |||||||||||
Sbjct 36738 GCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGACGAGAAAGCGCCGCTGAAGAAGATGC 36679
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
|||| || || ||||| ||| || | || | || | || | |||||| |||||||
Sbjct 36678 CCTCGACGGCAGCGAATGCGACCAGACGCTGCGCAAAGGTAGACTCCTTGTCGGAGATCC 36619
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|| ||| |||||||| |||||||| |||||| ||
Sbjct 36618 AGCGAAGGGCCCAGTCGGCCTTCTTGCGGATGCAAGG 36582
Score = 87.8 bits (96), Expect = 3e-12
Identities = 171/251 (68%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||||||||| | ||||| || ||||||||| |||||||| | |||||| |
Sbjct 36448 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGGGCCTCGGGAA 36389
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
|||| || || | ||| | ||| | ||| ||||| ||||| || ||||| || || |
Sbjct 36388 CCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCCGACGCGG 36329
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604
| ||||||||||||| || | ||| ||||||| | ||| || || |||
Sbjct 36328 CGAAGAAGGCAAGGATGTGGGATATGAAGAACCGCTCGTCATCGGTCAG-GCGGTTGTTC 36270
Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664
||| | || | ||| ||| ||| || | || || | |||||||| || || ||
Sbjct 36269 CAGTCGTGCATGTCCTTGGACAGATCGATCTCCTCAGCCGTCCAGAACGAGGCCTCAGCC 36210
Query 48665 TTTTTGTACAT 48675
|| ||||||||
Sbjct 36209 TTCTTGTACAT 36199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931522273679360
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