Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq722 412 5e-110 seq233 174 2e-38 seq522 129 8e-25 seq555 120 4e-22 >seq722 Length=76843 Score = 412 bits (456), Expect = 5e-110 Identities = 1012/1523 (66%), Gaps = 16/1523 (1%) Strand=Plus/Plus Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||| || | |||||||| || ||||| || || || || | ||| ||||| || || | Sbjct 5152 AGATCATTGCAAATGACCAGGGTAACCGCACTACGCCGTCTTTCGTGGCCTTCACGGACA 5211 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 || || | | || |||||||| || || ||| || ||||||||| ||| || | Sbjct 5212 CGGAGCGGTTGATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTGCCAACACCG 5271 Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542 | || ||||| |||||||| || || || |||||| | || | | ||||| | ||| | Sbjct 5272 TTTTCGACGCCAAGCGTCTGATCGGCCGGAAGTTTGCCGACCCGGAGGTCCAGGCCGACA 5331 Query 195543 TAAAGGACTGGTCTTATGAAG-TTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601 | ||| ||| | | | ||| |||| | | ||||| | ||||| | || | || Sbjct 5332 TGAAGCACTTCCCCT-TCAAGATTGT--CGAGCGTGGCGGC-AAGCCCGTCATCGAGGTC 5387 Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661 || || | || |||| || || || | ||||| || ||||| || |||||| |||| Sbjct 5388 GAGTTCAAGGGCGAGACCAAGCAGTTCACACCCGAGGAGATTTCCTCCATGGTGCTGATA 5447 Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||| |||||||| || | | | |||| || || || | || || || || Sbjct 5448 AAGATGCGCGAGACTGCTGAGGCGTACCTGGGCGGCACCGTTAACAACGCTGTCGTCACC 5507 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || |||||||||| | || || Sbjct 5508 GTCCCGGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCTGGTCTGATCGCC 5567 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| || | || ||||| || || || || ||||| || || || || ||| Sbjct 5568 GGCCTGAACGTGCTGCGGATCATCAACGAGCCCACGGCCGCTGCCATCGCCTACGGCCTG 5627 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||||| || | || || || ||||||| || || ||||| || || || Sbjct 5628 GACAAGAAGGTTGAGGGCGAGCGCAACGTGCTGATCTTCGACCTGGGTGGCGGCACCTTC 5687 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || || | ||||| | ||||| ||||| || ||| | || || ||||| Sbjct 5688 GATGTGTCGCTGCTGACGATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCCGGTGAC 5747 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTT 196020 || || | |||||||| || || || || || || || || ||| | ||||| Sbjct 5748 ACCCACTTGGGTGGTGAGGACTTTGACAACCGCCTGGTCAACCACTTCGTC-CAGGAGTT 5806 Query 196021 CCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGAC 196080 | || ||| | ||||| || | || || | | ||||| || || || | || Sbjct 5807 CAAGCGCAAGTACAAGAAGGACCTGTCGTCCAACGCCCGTGCTCTGCGCCGCCTGCGCAC 5866 Query 196081 TGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGA 196140 ||| || || |||||||| || || || || || ||||||| || | | ||||| || Sbjct 5867 TGCCTGCGAGCGTGCCAAGCGCACACTGTCGTCGTCGGCTCAGACCTCGATCGAGATCGA 5926 Query 196141 TTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTT 196200 || | | || || || |||||||| || | || |||||||| || || || ||| | Sbjct 5927 CTCCCTCTACGAGGGCATCGACTTCTACACTTCCATCACCCGTGCCCGCTTCGAGGAGCT 5986 Query 196201 AAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGACGC 196257 | || |||| | || || || | || ||||| | || || ||||| Sbjct 5987 GTGCCAGGACCTGTTCCG---GTCTACGCTGCAGCCGGTTGACCGTGTCCTGACGGACGC 6043 Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317 ||||| || |||||| |||| | || |||||||| || || || || || ||||| || Sbjct 6044 GAAGATCGACAAGTCTCAGGTGCACGAGATTGTCCTGGTCGGCGGCTCCACGCGTATCCC 6103 Query 196318 GAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377 | || || || || | | || |||||| || || ||||| ||||||| Sbjct 6104 GCGTATCCAGAAGCTGATCACGGACTACTTCAACGGCAAGGAGCCCAACAAGTCGATCAA 6163 Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437 ||| || || || || || || || || || || |||||||| || ||| || | Sbjct 6164 CCCCGACGAGGCCGTCGCCTACGGCGCTGCTGTGCAGGCTGCCATCCTCAGCGGCGACAC 6223 Query 196438 CAATAATAA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCT 196494 || || || |||| || | ||||| || || ||||| || | || || ||| | Sbjct 6224 CACCTCCAAGTCGACCAACGAGATCCTGCTGCTGGACGTTGCCCCGCTGTCGCTCGGTAT 6283 Query 196495 TGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAA 196554 || || || ||||| | ||||| || | || | ||||| || || || || || Sbjct 6284 CGAGACGGCCGGTGGCATGATGACCAAGCTGATCCCGCGCAACACCACGATCCCCACCAA 6343 Query 196555 GAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATA 196614 |||| | || || || |||| || || || || || ||||| | || || || || Sbjct 6344 GAAGTCGGAGGTGTTCTCGACGTTCTCTGACAACCAGCCCGGTGTGCTGATCCAGGTGTA 6403 Query 196615 TGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGG 196674 || || || || | || | ||||| ||| | || || || | || || ||||||| Sbjct 6404 CGAGGGCGAGCGTCCGCGCACCAAGGACAACAACCTGCTGGGCAAGTTTGAGCTGACGGG 6463 Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734 || || | ||||| | ||| || ||||| | || |||||| || ||||| || Sbjct 6464 CATCCCGCCGGCACCGCGGAATGTCCCGCAGATCGAGGTCACCTTCGACATGGACGCCAA 6523 Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGAT 196794 || || | ||||| | |||| ||| |||| | ||||| || | ||||| || || Sbjct 6524 CGGCATCATGAACGTGTCGGCTGTGGAGAAGGGCACGGGCAAGTCCAACAAGATCGTCAT 6583 Query 196795 TACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGA 196854 ||||| |||||||| || || || ||||| || ||||| || ||| | || ||||| Sbjct 6584 CACCAACGACAAGGGCCGTCTGTCCAAGGACGAGATTGAGCGCATGCTGGCGGAGGCGGA 6643 Query 196855 AAAGTACAGGGAAGAAGACGAGG 196877 |||| || ||| || ||||||| Sbjct 6644 GAAGTTCAAGGAGGAGGACGAGG 6666 >seq233 Length=18884 Score = 174 bits (192), Expect = 2e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || || || || || || || || |||||||| ||||| ||||||| Sbjct 2033 GTATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGT 1974 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | ||||| ||||| ||| |||| | |||||||| |||||||| ||||| || || || | Sbjct 1973 CGGACACGATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCGCCGGACC 1914 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || ||||| || || ||||| || || || || ||||| || |||| Sbjct 1913 AGCAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACCCTGAGCGACTACA 1854 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || |||| |||||||| || || ||||| || || | || || ||||| Sbjct 1853 ACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGTCTGCGCGGTGG 1805 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || || || || || |||||||| ||||| |||||||| Sbjct 2259 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 2200 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| | |||||||| || ||||| ||||| || || || ||| Sbjct 2199 GACACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 2140 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || || ||||| || ||||| || || || || |||||| Sbjct 2139 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 2080 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| || || | || || || ||| Sbjct 2079 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGCGGT 2032 >seq522 Length=89899 Score = 129 bits (142), Expect = 8e-25 Identities = 505/782 (65%), Gaps = 23/782 (3%) Strand=Plus/Plus Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 |||||||||||| ||| || | || || || | || | | || ||| | || | Sbjct 8072 AGATGAAGGAGATTGCCGAGGCCAAGATCGGCAAGAAGGTCGAGAAGGCTGTTATCACGG 8131 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||| || |||||||| | ||| || ||| Sbjct 8132 TCCCCGCCTACTTCAACGACAACCAGCGCCAGGCCACCAAGGACGCCGGTGCCATCTCGG 8191 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| || | || ||||| || || || ||||| || ||||| || ||||||| Sbjct 8192 GCCTGAACGTGCTGCGCATCATCAACGAGCCCACTGCGGCCGCCATTGCCTACGGTCTGG 8251 Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | | |||| | | | || ||||| |||||| ||||| ||||| ||||| | Sbjct 8252 GCTCGGGCAAGTCCGCCAAGGAGCGGAATGTCCTGATCTACGATCTGGGTGGCGGTACTT 8311 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || || || || | || ||| | ||| || ||||| || ||||||| Sbjct 8312 TCGATGTCTCGCTGCTGAACATCCAGGGCGGTGTGTTCACCGTCAAGGCCACCGCTGGTG 8371 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACG--TCTTCTCCGTCATTTGTCTG-ATG 196016 | || ||||| ||||| | || ||||| |||| || || | | | || | | | Sbjct 8372 ACACCCATCTGGGTGGCCAGGACTTCGA--CACGAACCTGCT-GGACTTCTGCAAGAAGG 8428 Query 196017 AGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTA 196076 | |||| |||| |||||| || | || || | | | || || || || || Sbjct 8429 ACTTCCAGAAGAAGACTAAGAAGGACCTGTCGGGCGACGCGCGCGCCCTGCGGCGTCTGC 8488 Query 196077 GGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGTTGA 196134 |||| || || || || ||||| || || ||||| ||| | || | | | | || Sbjct 8489 GGACGGCTTGCGAGCGCGCCAAGCGCACGCTCTC--GAGCGGCACCCAGGCCACGATCGA 8546 Query 196135 GATTGATTCGTTGTTTGACGGAATTGACTTC--TATACAACTATTACCCGTGCACGTTTT 196192 ||| || ||| | || ||||| |||||| || || || |||||||| ||||| Sbjct 8547 GATCGACTCGCTCTTCGACGGCGAGGACTTCAGCATGCA--GATCACCCGTGCCCGTTTC 8604 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTT 196249 || || | || | | | | || ||| | | |||| || || | || || || Sbjct 8605 GAGGACCTGAA--CAGCGTCGCTT-TCAAGGGCACCCTGGACCCCGTGGCCCAGGTCCTC 8661 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||||| | || || ||| ||| || || || || || || || || || || Sbjct 8662 AAGGACGCCAGCATCGAGAAGAGCGCGGTCGACGAGATCGTGCTGGTCGGCGGCTCCACG 8721 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| ||| || || || |||| | |||||| || || | | | || Sbjct 8722 CGTATCCCGCGTATCCAGAAGCTGCTGACCGACTTCTTTAACGGCAAGAAGCTCGAGAAG 8781 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | |||||||| ||||| || || || || ||||| ||||| ||||| | ||| || || Sbjct 8782 AGCATCAACCCCGATGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCCGGTATCCTGTCG 8841 Query 196430 GG 196431 || Sbjct 8842 GG 8843 >seq555 Length=206003 Score = 120 bits (132), Expect = 4e-22 Identities = 198/279 (71%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || ||||| || || ||||||| || || || |||||||| ||||| || Sbjct 85382 GCTGTCGTCACTGTGCCCGCCTACTTCAACGACAACCAGCGCCAGGCGACCAAGGATGCC 85441 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | | ||||| || || || |||| | | ||| |||| || || || || || || || Sbjct 85442 GGCACCATTGCTGGCCTGAA-TGTCCTCCGTATTGTCAACGAGCCCACTGCAGCCGCCAT 85500 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGG 195888 || || ||||||||||||| ||||| || ||| | || || | ||| || || || Sbjct 85501 CGCCTACGGTCTGGACAAGACCAAGGGCG-AGAGCCAGAT-CATCG-TCTACGACCTTGG 85557 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 || ||||| || |||||||| || ||| || || | ||| | ||||| || ||| Sbjct 85558 CGGCGGTACCTTCGATGTCTCTCTCCTCTCAATCGATGAGGGTGTCTTCGAGGTCCTGGC 85617 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||||| ||||| || ||||| ||||| || || ||||| Sbjct 85618 TACTGCAGGTGACACGCATCTTGGTGGCGAGGACTTCGA 85656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657854966154880