Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq722 412 5e-110
seq233 174 2e-38
seq522 129 8e-25
seq555 120 4e-22
>seq722
Length=76843
Score = 412 bits (456), Expect = 5e-110
Identities = 1012/1523 (66%), Gaps = 16/1523 (1%)
Strand=Plus/Plus
Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422
|||| || | |||||||| || ||||| || || || || | ||| ||||| || || |
Sbjct 5152 AGATCATTGCAAATGACCAGGGTAACCGCACTACGCCGTCTTTCGTGGCCTTCACGGACA 5211
Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482
|| || | | || |||||||| || || ||| || ||||||||| ||| || |
Sbjct 5212 CGGAGCGGTTGATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTGCCAACACCG 5271
Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542
| || ||||| |||||||| || || || |||||| | || | | ||||| | ||| |
Sbjct 5272 TTTTCGACGCCAAGCGTCTGATCGGCCGGAAGTTTGCCGACCCGGAGGTCCAGGCCGACA 5331
Query 195543 TAAAGGACTGGTCTTATGAAG-TTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601
| ||| ||| | | | ||| |||| | | ||||| | ||||| | || | ||
Sbjct 5332 TGAAGCACTTCCCCT-TCAAGATTGT--CGAGCGTGGCGGC-AAGCCCGTCATCGAGGTC 5387
Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661
|| || | || |||| || || || | ||||| || ||||| || |||||| ||||
Sbjct 5388 GAGTTCAAGGGCGAGACCAAGCAGTTCACACCCGAGGAGATTTCCTCCATGGTGCTGATA 5447
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||| |||||||| || | | | |||| || || || | || || || ||
Sbjct 5448 AAGATGCGCGAGACTGCTGAGGCGTACCTGGGCGGCACCGTTAACAACGCTGTCGTCACC 5507
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || || || || ||||| || |||||||||| | || ||
Sbjct 5508 GTCCCGGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCTGGTCTGATCGCC 5567
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| || ||| || | || ||||| || || || || ||||| || || || || |||
Sbjct 5568 GGCCTGAACGTGCTGCGGATCATCAACGAGCCCACGGCCGCTGCCATCGCCTACGGCCTG 5627
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
|||||||| || | || || || ||||||| || || ||||| || || ||
Sbjct 5628 GACAAGAAGGTTGAGGGCGAGCGCAACGTGCTGATCTTCGACCTGGGTGGCGGCACCTTC 5687
Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961
||||| || || || | ||||| | ||||| ||||| || ||| | || || |||||
Sbjct 5688 GATGTGTCGCTGCTGACGATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCCGGTGAC 5747
Query 195962 ACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTT 196020
|| || | |||||||| || || || || || || || || ||| | |||||
Sbjct 5748 ACCCACTTGGGTGGTGAGGACTTTGACAACCGCCTGGTCAACCACTTCGTC-CAGGAGTT 5806
Query 196021 CCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGAC 196080
| || ||| | ||||| || | || || | | ||||| || || || | ||
Sbjct 5807 CAAGCGCAAGTACAAGAAGGACCTGTCGTCCAACGCCCGTGCTCTGCGCCGCCTGCGCAC 5866
Query 196081 TGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGA 196140
||| || || |||||||| || || || || || ||||||| || | | ||||| ||
Sbjct 5867 TGCCTGCGAGCGTGCCAAGCGCACACTGTCGTCGTCGGCTCAGACCTCGATCGAGATCGA 5926
Query 196141 TTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTT 196200
|| | | || || || |||||||| || | || |||||||| || || || ||| |
Sbjct 5927 CTCCCTCTACGAGGGCATCGACTTCTACACTTCCATCACCCGTGCCCGCTTCGAGGAGCT 5986
Query 196201 AAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGTGACGC 196257
| || |||| | || || || | || ||||| | || || |||||
Sbjct 5987 GTGCCAGGACCTGTTCCG---GTCTACGCTGCAGCCGGTTGACCGTGTCCTGACGGACGC 6043
Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317
||||| || |||||| |||| | || |||||||| || || || || || ||||| ||
Sbjct 6044 GAAGATCGACAAGTCTCAGGTGCACGAGATTGTCCTGGTCGGCGGCTCCACGCGTATCCC 6103
Query 196318 GAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAA 196377
| || || || || | | || |||||| || || ||||| |||||||
Sbjct 6104 GCGTATCCAGAAGCTGATCACGGACTACTTCAACGGCAAGGAGCCCAACAAGTCGATCAA 6163
Query 196378 CCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGA 196437
||| || || || || || || || || || || |||||||| || ||| || |
Sbjct 6164 CCCCGACGAGGCCGTCGCCTACGGCGCTGCTGTGCAGGCTGCCATCCTCAGCGGCGACAC 6223
Query 196438 CAATAATAA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCT 196494
|| || || |||| || | ||||| || || ||||| || | || || ||| |
Sbjct 6224 CACCTCCAAGTCGACCAACGAGATCCTGCTGCTGGACGTTGCCCCGCTGTCGCTCGGTAT 6283
Query 196495 TGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAA 196554
|| || || ||||| | ||||| || | || | ||||| || || || || ||
Sbjct 6284 CGAGACGGCCGGTGGCATGATGACCAAGCTGATCCCGCGCAACACCACGATCCCCACCAA 6343
Query 196555 GAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATA 196614
|||| | || || || |||| || || || || || ||||| | || || || ||
Sbjct 6344 GAAGTCGGAGGTGTTCTCGACGTTCTCTGACAACCAGCCCGGTGTGCTGATCCAGGTGTA 6403
Query 196615 TGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGG 196674
|| || || || | || | ||||| ||| | || || || | || || |||||||
Sbjct 6404 CGAGGGCGAGCGTCCGCGCACCAAGGACAACAACCTGCTGGGCAAGTTTGAGCTGACGGG 6463
Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734
|| || | ||||| | ||| || ||||| | || |||||| || ||||| ||
Sbjct 6464 CATCCCGCCGGCACCGCGGAATGTCCCGCAGATCGAGGTCACCTTCGACATGGACGCCAA 6523
Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGAT 196794
|| || | ||||| | |||| ||| |||| | ||||| || | ||||| || ||
Sbjct 6524 CGGCATCATGAACGTGTCGGCTGTGGAGAAGGGCACGGGCAAGTCCAACAAGATCGTCAT 6583
Query 196795 TACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGA 196854
||||| |||||||| || || || ||||| || ||||| || ||| | || |||||
Sbjct 6584 CACCAACGACAAGGGCCGTCTGTCCAAGGACGAGATTGAGCGCATGCTGGCGGAGGCGGA 6643
Query 196855 AAAGTACAGGGAAGAAGACGAGG 196877
|||| || ||| || |||||||
Sbjct 6644 GAAGTTCAAGGAGGAGGACGAGG 6666
>seq233
Length=18884
Score = 174 bits (192), Expect = 2e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||||||||| || || || || || || || || |||||||| ||||| |||||||
Sbjct 2033 GTATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGT 1974
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| ||||| ||| |||| | |||||||| |||||||| ||||| || || || |
Sbjct 1973 CGGACACGATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCGCCGGACC 1914
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || || || ||||| || || ||||| || || || || ||||| || ||||
Sbjct 1913 AGCAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACCCTGAGCGACTACA 1854
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|| |||| |||||||| || || ||||| || || | || || |||||
Sbjct 1853 ACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGTCTGCGCGGTGG 1805
Score = 159 bits (176), Expect = 5e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || || || || || || || |||||||| ||||| ||||||||
Sbjct 2259 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 2200
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| |||| | |||||||| || ||||| ||||| || || || |||
Sbjct 2199 GACACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 2140
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || ||||| || || ||||| || ||||| || || || || ||||||
Sbjct 2139 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 2080
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||| || || ||||| || || | || || || |||
Sbjct 2079 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGCGGT 2032
>seq522
Length=89899
Score = 129 bits (142), Expect = 8e-25
Identities = 505/782 (65%), Gaps = 23/782 (3%)
Strand=Plus/Plus
Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722
|||||||||||| ||| || | || || || | || | | || ||| | || |
Sbjct 8072 AGATGAAGGAGATTGCCGAGGCCAAGATCGGCAAGAAGGTCGAGAAGGCTGTTATCACGG 8131
Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782
| || || ||||||| || || || ||||| || |||||||| | ||| || |||
Sbjct 8132 TCCCCGCCTACTTCAACGACAACCAGCGCCAGGCCACCAAGGACGCCGGTGCCATCTCGG 8191
Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842
| || ||| || | || ||||| || || || ||||| || ||||| || |||||||
Sbjct 8192 GCCTGAACGTGCTGCGCATCATCAACGAGCCCACTGCGGCCGCCATTGCCTACGGTCTGG 8251
Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
| | |||| | | | || ||||| |||||| ||||| ||||| ||||| |
Sbjct 8252 GCTCGGGCAAGTCCGCCAAGGAGCGGAATGTCCTGATCTACGATCTGGGTGGCGGTACTT 8311
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| |||||||| || || || || | || ||| | ||| || ||||| || |||||||
Sbjct 8312 TCGATGTCTCGCTGCTGAACATCCAGGGCGGTGTGTTCACCGTCAAGGCCACCGCTGGTG 8371
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACG--TCTTCTCCGTCATTTGTCTG-ATG 196016
| || ||||| ||||| | || ||||| |||| || || | | | || | | |
Sbjct 8372 ACACCCATCTGGGTGGCCAGGACTTCGA--CACGAACCTGCT-GGACTTCTGCAAGAAGG 8428
Query 196017 AGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTA 196076
| |||| |||| |||||| || | || || | | | || || || || ||
Sbjct 8429 ACTTCCAGAAGAAGACTAAGAAGGACCTGTCGGGCGACGCGCGCGCCCTGCGGCGTCTGC 8488
Query 196077 GGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGTTGA 196134
|||| || || || || ||||| || || ||||| ||| | || | | | | ||
Sbjct 8489 GGACGGCTTGCGAGCGCGCCAAGCGCACGCTCTC--GAGCGGCACCCAGGCCACGATCGA 8546
Query 196135 GATTGATTCGTTGTTTGACGGAATTGACTTC--TATACAACTATTACCCGTGCACGTTTT 196192
||| || ||| | || ||||| |||||| || || || |||||||| |||||
Sbjct 8547 GATCGACTCGCTCTTCGACGGCGAGGACTTCAGCATGCA--GATCACCCGTGCCCGTTTC 8604
Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTT 196249
|| || | || | | | | || ||| | | |||| || || | || || ||
Sbjct 8605 GAGGACCTGAA--CAGCGTCGCTT-TCAAGGGCACCCTGGACCCCGTGGCCCAGGTCCTC 8661
Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309
||||| | || || ||| ||| || || || || || || || || || ||
Sbjct 8662 AAGGACGCCAGCATCGAGAAGAGCGCGGTCGACGAGATCGTGCTGGTCGGCGGCTCCACG 8721
Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369
||||| ||| || || || |||| | |||||| || || | | | ||
Sbjct 8722 CGTATCCCGCGTATCCAGAAGCTGCTGACCGACTTCTTTAACGGCAAGAAGCTCGAGAAG 8781
Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429
| |||||||| ||||| || || || || ||||| ||||| ||||| | ||| || ||
Sbjct 8782 AGCATCAACCCCGATGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCCGGTATCCTGTCG 8841
Query 196430 GG 196431
||
Sbjct 8842 GG 8843
>seq555
Length=206003
Score = 120 bits (132), Expect = 4e-22
Identities = 198/279 (71%), Gaps = 5/279 (2%)
Strand=Plus/Plus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| || || ||||| || || ||||||| || || || |||||||| ||||| ||
Sbjct 85382 GCTGTCGTCACTGTGCCCGCCTACTTCAACGACAACCAGCGCCAGGCGACCAAGGATGCC 85441
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAAT 195828
| | ||||| || || || |||| | | ||| |||| || || || || || || ||
Sbjct 85442 GGCACCATTGCTGGCCTGAA-TGTCCTCCGTATTGTCAACGAGCCCACTGCAGCCGCCAT 85500
Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGG 195888
|| || ||||||||||||| ||||| || ||| | || || | ||| || || ||
Sbjct 85501 CGCCTACGGTCTGGACAAGACCAAGGGCG-AGAGCCAGAT-CATCG-TCTACGACCTTGG 85557
Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948
|| ||||| || |||||||| || ||| || || | ||| | ||||| || |||
Sbjct 85558 CGGCGGTACCTTCGATGTCTCTCTCCTCTCAATCGATGAGGGTGTCTTCGAGGTCCTGGC 85617
Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|||||| ||||| || ||||| ||||| || || |||||
Sbjct 85618 TACTGCAGGTGACACGCATCTTGGTGGCGAGGACTTCGA 85656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657854966154880
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