Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq53 96.9 1e-14 >seq53 Length=48607 Score = 96.9 bits (106), Expect = 1e-14 Identities = 174/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 || ||||| || ||||| || | || || || || || ||||| ||||| | ||| Sbjct 26251 CGGCGCTGGATGTAACCCGTCTCGGCCGTCTTCACGGCAGTGTCAATGAGACCTTCGCGA 26192 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTC 302711 ||| |||| || |||||||| | ||| ||| ||| || || | | | ||| |||| Sbjct 26191 CCAGCCATGGCGTGGAAGAAGAACTCGGTCGG-CGTGAGACCACGGAGGTACGAGTTCTC 26133 Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771 || |||||||| ||||||||||| | || |||||| ||||||||||| || | || Sbjct 26132 CACAAAACCACGAGCCTCGGGCGAGTAATCATCCTTGGTGAAGTGTGGCAGTGTGCGGTA 26073 Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831 || | || | || || || |||| || || ||||||| || | | | |||| Sbjct 26072 CTTGAAACCAAAAGGAATGCGTCTTCCCTCCACAATCTGCTGACCGACCAAGGCCGTCAT 26013 Query 302832 CTGCGAAATATT 302843 ||| ||||| || Sbjct 26012 CTGGGAAATGTT 26001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471800552672648