Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq376 196 4e-45
seq233 114 1e-20
seq23 96.9 3e-15
seq204 91.5 1e-13
>seq376
Length=8930
Score = 196 bits (216), Expect = 4e-45
Identities = 983/1539 (64%), Gaps = 68/1539 (4%)
Strand=Plus/Plus
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
||||| || || || |||| || || || ||| |||||| ||| | ||||| ||
Sbjct 5454 ACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAG 5513
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
|||||||||| ||||| ||||| | || | || |||||||| ||||||||| |||
Sbjct 5514 CATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACCAACAGA 5573
Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAG------CGACGACCAGTCCCAC 138681
|| || | ||||| |||||| |||||| ||| ||||||||||
Sbjct 5574 CTGTTGCGCACGCCGTGCTCCTTGAT------CTTGAGACGCAGCGAGTCCCAGTCCCAC 5627
Query 138682 AAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG 138741
| || | || || || ||||||||| |||| | || ||| |||||
Sbjct 5628 AGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAGAC 5687
Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801
|| ||||||| ||| || || | | ||||| ||| |||| ||||||
Sbjct 5688 CCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAGCGCA 5747
Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCT-CGGCGCTCTCGTA 138860
| | ||| || || || ||||||| |||||| || |||| ||||| ||| |
Sbjct 5748 GCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCG-ACTCAAA 5806
Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920
||||| || ||| | |||||| || |||| || || || ||||| |||| || ||
Sbjct 5807 AGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGGCCG 5866
Query 138921 ATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGA 138976
|| |||| || ||| ||||| || || | ||| || ||||| || |||||||
Sbjct 5867 GTGACGCA----TGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGACGTCGATGA 5922
Query 138977 TTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTAT 139035
| ||| | || ||||| ||||||| || | | | || | | | || |||||
Sbjct 5923 TACGGTTCAGGTTGCGCACCACCACCTGCGT-GACCTCGTGAAGCTTCTGGAAGTCGTAC 5981
Query 139036 GTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACA--CAAATCGAGGCTATGT 139093
|| | ||||| ||| ||| ||||| | | || | ||| | | ||
Sbjct 5982 GT---CTCGTTGGCGT------AGTCCACAAA--AGACGGCAGCGCCAGCGACGACAGGT 6030
Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153
||||||||||||| || ||||| ||| ||| |||| ||| || | |||| || |
Sbjct 6031 TGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAGC 6090
Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213
||| || || | || | || ||||| || ||||| || || ||||| ||||
Sbjct 6091 TGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCA 6150
Query 139214 TATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG-CT 139272
| |||| |||| || ||| || | ||| | | | | ||| | | | ||
Sbjct 6151 TGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCCT 6210
Query 139273 TGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCG 139331
|| || || | | | | || ||||||||| ||||| | | ||||| |||
Sbjct 6211 TGACCGTG-CGACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACTCG 6269
Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391
|| |||||| ||| | ||| | | |||| | || ||||| |||| ||| ||||
Sbjct 6270 -TCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGCC 6328
Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451
|||| || || ||| |||||||||| ||||| ||||| | || | | || |||||
Sbjct 6329 GTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCG 6388
Query 139452 CGCCTTCTTATCTTC-CGAACCCATGTTACGT-TTCATGTTAAGGAAATCAAAAACGTCA 139509
|| | || || | | ||||| | | | || || ||||| || || ||||||
Sbjct 6389 GGC--GCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCA 6446
Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCG 139566
|| ||||| || ||||| |||||| | |||||| ||| ||| ||||| || ||
Sbjct 6447 GCATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGGTCC 6506
Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626
|| | || | | || ||||| ||||||| ||| || | | ||| | | ||| |||
Sbjct 6507 ACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTACCG 6566
Query 139627 TTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682
||||| || | | ||| | | || ||| |||| | || || || || |||||
Sbjct 6567 TTGGTGCCGGCAATGTATGAGCCAGTGGCG----CGGATGCGGTGGACGTTCATCCCGAT 6622
Query 139683 TCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTA 139741
|| || | ||||| || | | ||||| || | | || ||||| || || |
Sbjct 6623 GCCACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTG-AGGGTGTCGTAGATGCCCTCAA 6681
Query 139742 TGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGG 139801
||||||| |||| ||| ||||| ||||| |||| || || | | | |||||| |
Sbjct 6682 TGCTGTCATCCTTCATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAG 6741
Query 139802 CTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTT 139861
| || || || || |||||| ||||| | | || ||||| | | |||||| |
Sbjct 6742 CGTTGAAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTACGTCT 6801
Query 139862 CGATG--GCGCT-CACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATAT 139918
| | | ||||| ||| | || || ||| ||||| | || ||||| | ||| |
Sbjct 6802 CCAGGACGCGCTCCACGTTGTC---GCCCCAGATCCCGACCGCCACGCGCATGATCATGT 6858
Query 139919 GTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGT 139976
| ||| ||| || | | | ||| | || || ||| || | || ||| || ||
Sbjct 6859 GCTGGGGCCGCTCAACGATCTTGCCGTTGAGCTTAAGCAGGTACGAACG--CTCCAGCGT 6916
Query 139977 CTTGTAGCCAAAGTACCTATAGTTGAAATCGAGCGCATA 140015
|||| |||||||||| |||||||| ||| | ||||
Sbjct 6917 CTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCATA 6955
>seq233
Length=18884
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || ||||||||||| || || || |
Sbjct 1803 ATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACGATTACGCTCGAGGTGGAGAGCAGC 1744
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1743 GACACGATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1684
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| || || || || |||||||||||| | | | |||| || || |||
Sbjct 1683 CAGCGGCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGGCGGACGCTGTCCGACTACAAC 1624
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| ||||| || || ||| ||||| | || ||||||| |||
Sbjct 1623 ATTCAGAAGGAGAGCACGCTGCACCTGGTGCTCCGTCTGCGCGGTGGC 1576
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || ||||||||||| || || || |
Sbjct 1575 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACGCTCGAGGTGGAGAGCAGC 1516
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1515 GACACGATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAG 1456
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||||||||||| | | | |||| || || |||
Sbjct 1455 CAGCGGCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGGCGGACGCTGTCGGACTACAAC 1396
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || ||| ||||| |||| |||| || ||
Sbjct 1395 ATCCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGGCTGCGGGGTGG 1349
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| ||||| || || || || || || || || | |
Sbjct 2259 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 2200
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 2199 GACACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 2140
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || |||||||||||| | | || || || |||
Sbjct 2139 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 2080
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || ||| ||||| | || ||||||| ||
Sbjct 2079 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGCGG 2033
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || ||||| ||||| || || || || || || || || | |
Sbjct 2031 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 1972
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || || || || || || || || || ||
Sbjct 1971 GACACGATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCGCCGGACCAG 1912
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | |||||||| || || ||||||||||| | | | || || || |||
Sbjct 1911 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACCCTGAGCGACTACAAC 1852
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| ||||| ||||| || ||| ||||| | || ||||||| |||
Sbjct 1851 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGTCTGCGCGGTGGC 1804
>seq23
Length=165582
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || || || |||||||||| || ||
Sbjct 62079 AAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCCTGATCTTTGCAGGCAAG 62138
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||||||||| | | | |||| || || ||||| || ||||| ||||| || |||
Sbjct 62139 CAGCTGGAGGACGGCCGGACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTGCAC 62198
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| |||| ||||||| ||
Sbjct 62199 CTGGTGCTGCGTCTGCGCGGTGG 62221
>seq204
Length=21219
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || || || || || || || || | |
Sbjct 5684 GATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGAGCTC 5743
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || ||||| ||
Sbjct 5744 GGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 5803
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||||| ||||| || ||||| ||||| | | | | || || || ||
Sbjct 5804 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 5863
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||| || ||||| || || ||| ||||| |||| |||| || ||||
Sbjct 5864 CATCCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGCCTGCGTGGCGGCG 5913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892516157120
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