Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq376 196 4e-45 seq233 114 1e-20 seq23 96.9 3e-15 seq204 91.5 1e-13 >seq376 Length=8930 Score = 196 bits (216), Expect = 4e-45 Identities = 983/1539 (64%), Gaps = 68/1539 (4%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || || |||| || || || ||| |||||| ||| | ||||| || Sbjct 5454 ACCTGGAACTCGCCTGCCAGCACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAG 5513 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 |||||||||| ||||| ||||| | || | || |||||||| ||||||||| ||| Sbjct 5514 CATTCGTTGTTGCCCAGGATCTGCGAGGTCGATGCCGTCGGCATCGGCGCCACCAACAGA 5573 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAG------CGACGACCAGTCCCAC 138681 || || | ||||| |||||| |||||| ||| |||||||||| Sbjct 5574 CTGTTGCGCACGCCGTGCTCCTTGAT------CTTGAGACGCAGCGAGTCCCAGTCCCAC 5627 Query 138682 AAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG 138741 | || | || || || ||||||||| |||| | || ||| ||||| Sbjct 5628 AGGTCCGTCGGCTTGACGTCCCACATATCAAACTGCAGGATGCCCTGCGACACGGGAGAC 5687 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || ||||||| ||| || || | | ||||| ||| |||| |||||| Sbjct 5688 CCCTCGTACGTCGAGTACACGCCCTCCAGCTTCGCCAGGTCGCATGACGCCGTCAGCGCA 5747 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCT-CGGCGCTCTCGTA 138860 | | ||| || || || ||||||| |||||| || |||| ||||| ||| | Sbjct 5748 GCGTGGTAGATCGTCTCAAAGATCTGCTTGTTGAGCTCACGCGCCTCCGGCG-ACTCAAA 5806 Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920 ||||| || ||| | |||||| || |||| || || || ||||| |||| || || Sbjct 5807 AGGCATCCGCAGCGCCAGGAACGCATCCGCCAAGCCCTGGACACCCACACCGATCGGCCG 5866 Query 138921 ATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGA 138976 || |||| || ||| ||||| || || | ||| || ||||| || ||||||| Sbjct 5867 GTGACGCA----TGTTGCTGTTGCGCGCCTCCGGCACAGGGTAGTAGTTGACGTCGATGA 5922 Query 138977 TTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTAT 139035 | ||| | || ||||| ||||||| || | | | || | | | || ||||| Sbjct 5923 TACGGTTCAGGTTGCGCACCACCACCTGCGT-GACCTCGTGAAGCTTCTGGAAGTCGTAC 5981 Query 139036 GTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACA--CAAATCGAGGCTATGT 139093 || | ||||| ||| ||| ||||| | | || | ||| | | || Sbjct 5982 GT---CTCGTTGGCGT------AGTCCACAAA--AGACGGCAGCGCCAGCGACGACAGGT 6030 Query 139094 TGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTAC 139153 ||||||||||||| || ||||| ||| ||| |||| ||| || | |||| || | Sbjct 6031 TGCACACCGCCACCTCATCGGGCGCGCAGTACTCGATAATCTCTGTGCACAGGTTGGAGC 6090 Query 139154 ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCA 139213 ||| || || | || | || ||||| || ||||| || || ||||| |||| Sbjct 6091 TGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAGCA 6150 Query 139214 TATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG-CT 139272 | |||| |||| || ||| || | ||| | | | | ||| | | | || Sbjct 6151 TGAACGGGTTGCCGGTCTCCGTCTGCGCCTCCAGGACGGCATACCACAGCTTCTGGGCCT 6210 Query 139273 TGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCG 139331 || || || | | | | || ||||||||| ||||| | | ||||| ||| Sbjct 6211 TGACCGTG-CGACGGCCACGGCCCTCCTTCTCGTACTTCTCGTACAAGGCCTCGAACTCG 6269 Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 || |||||| ||| | ||| | | |||| | || ||||| |||| ||| |||| Sbjct 6270 -TCGCCGTAGCAGTCGGCCAGACCCGGGCACTCATTGGGGCACATCAGCGTCCAGTCGCC 6328 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 |||| || || ||| |||||||||| ||||| ||||| | || | | || ||||| Sbjct 6329 GTTCTTCTCCACACGCTTCATGAACAGGTCCGGGATCCAGAGCGCCAGGAACAGGTCGCG 6388 Query 139452 CGCCTTCTTATCTTC-CGAACCCATGTTACGT-TTCATGTTAAGGAAATCAAAAACGTCA 139509 || | || || | | ||||| | | | || || ||||| || || |||||| Sbjct 6389 GGC--GCGTACCTCCTCCTTGCCATGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCA 6446 Query 139510 GCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCG 139566 || ||||| || ||||| |||||| | |||||| ||| ||| ||||| || || Sbjct 6447 GCATGCCACGGCTCCAGGTAGATGCAGAAGGCGCCTGGCCGCTTGTTTCCACCCTGGTCC 6506 Query 139567 ACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCG 139626 || | || | | || ||||| ||||||| ||| || | | ||| | | ||| ||| Sbjct 6507 ACATAGCGGGCCGTGTTGTTGAACACGCGCAGCATAGGGACAATGCCGTTGGATGTACCG 6566 Query 139627 TTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682 ||||| || | | ||| | | || ||| |||| | || || || || ||||| Sbjct 6567 TTGGTGCCGGCAATGTATGAGCCAGTGGCG----CGGATGCGGTGGACGTTCATCCCGAT 6622 Query 139683 TCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTA 139741 || || | ||||| || | | ||||| || | | || ||||| || || | Sbjct 6623 GCCACCCGCCGTCTTGGAGATCATAGCGCAAGTCTTG-AGGGTGTCGTAGATGCCCTCAA 6681 Query 139742 TGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGG 139801 ||||||| |||| ||| ||||| ||||| |||| || || | | | |||||| | Sbjct 6682 TGCTGTCATCCTTCATGTCAACCAGGAAGCACGACGCGAGCTGGGCTTGGGGCGTGCCAG 6741 Query 139802 CTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTT 139861 | || || || || |||||| ||||| | | || ||||| | | |||||| | Sbjct 6742 CGTTGAAAAGCGTGGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTACGTCT 6801 Query 139862 CGATG--GCGCT-CACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATAT 139918 | | | ||||| ||| | || || ||| ||||| | || ||||| | ||| | Sbjct 6802 CCAGGACGCGCTCCACGTTGTC---GCCCCAGATCCCGACCGCCACGCGCATGATCATGT 6858 Query 139919 GTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGT 139976 | ||| ||| || | | | ||| | || || ||| || | || ||| || || Sbjct 6859 GCTGGGGCCGCTCAACGATCTTGCCGTTGAGCTTAAGCAGGTACGAACG--CTCCAGCGT 6916 Query 139977 CTTGTAGCCAAAGTACCTATAGTTGAAATCGAGCGCATA 140015 |||| |||||||||| |||||||| ||| | |||| Sbjct 6917 CTTGAAGCCAAAGTATTGGTAGTTGAAGTCGCGGTCATA 6955 >seq233 Length=18884 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || ||||||||||| || || || | Sbjct 1803 ATGCAGATCTTTGTCAAGACCCTGACGGGCAAGACGATTACGCTCGAGGTGGAGAGCAGC 1744 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 1743 GACACGATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1684 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || |||||||||||| | | | |||| || || ||| Sbjct 1683 CAGCGGCTGATTTTCGCGGGCAAGCAGCTGGAGGATGGGCGGACGCTGTCCGACTACAAC 1624 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| || || ||| ||||| | || ||||||| ||| Sbjct 1623 ATTCAGAAGGAGAGCACGCTGCACCTGGTGCTCCGTCTGCGCGGTGGC 1576 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||||||||| || || || | Sbjct 1575 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATTACGCTCGAGGTGGAGAGCAGC 1516 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 1515 GACACGATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGGATCCCGCCGGACCAG 1456 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || ||||||||||| | | | |||| || || ||| Sbjct 1455 CAGCGGCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGGCGGACGCTGTCGGACTACAAC 1396 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| ||||| |||| |||| || || Sbjct 1395 ATCCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGGCTGCGGGGTGG 1349 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| || || || || || || || || | | Sbjct 2259 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 2200 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 2199 GACACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 2140 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || |||||||||||| | | || || || ||| Sbjct 2139 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 2080 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| ||||| | || ||||||| || Sbjct 2079 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGCGG 2033 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| || || || || || || || || | | Sbjct 2031 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 1972 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || || || || || Sbjct 1971 GACACGATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGCATCCCGCCGGACCAG 1912 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | |||||||| || || ||||||||||| | | | || || || ||| Sbjct 1911 CAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACCCTGAGCGACTACAAC 1852 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| ||||| || ||| ||||| | || ||||||| ||| Sbjct 1851 ATTCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGTCTGCGCGGTGGC 1804 >seq23 Length=165582 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || || || |||||||||| || || Sbjct 62079 AAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAGCGCCTGATCTTTGCAGGCAAG 62138 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||||||||| | | | |||| || || ||||| || ||||| ||||| || ||| Sbjct 62139 CAGCTGGAGGACGGCCGGACCCTGTCCGACTACAACATCCAGAAGGAGTCGACTCTGCAC 62198 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||| ||||||| || Sbjct 62199 CTGGTGCTGCGTCTGCGCGGTGG 62221 >seq204 Length=21219 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || || || || || | | Sbjct 5684 GATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGAGCTC 5743 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 5744 GGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 5803 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| ||||| || ||||| ||||| | | | | || || || || Sbjct 5804 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 5863 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| || || ||| ||||| |||| |||| || |||| Sbjct 5864 CATCCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGCCTGCGTGGCGGCG 5913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892516157120