Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq897 147 2e-30
seq233 89.7 4e-13
>seq897
Length=67576
Score = 147 bits (162), Expect = 2e-30
Identities = 203/284 (71%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410
||||||||| |||||| || || || |||||| | ||| ||| ||||||| ||||
Sbjct 2053 ACAAACTTGGAGATGAAGCCGTCGAGATAGTCCTGCAGCTTGGCGGCCTCGTGGGCGCCG 1994
Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470
|||| ||| | || |||| ||| | || || ||||| ||||| | ||
Sbjct 1993 TTGATGATCCAGCGGTCGTCGGGCGGGTCGCTGTTGGTCTGGGCGCCGAGCTCAAAGCCA 1934
Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530
|||||||| || |||| ||||||| || | |||| || ||||| | || ||||
Sbjct 1933 AAGTACTTGATCAGGTACGTGGCCGGGCGGGCCAGCGACTGGGCGACGCTGCTCAGGTTG 1874
Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590
|| || |||||||||||||||||||| ||||||| ||||| ||||||| |||
Sbjct 1873 GTGACCACGGTCTTGATGCCGTTGCCCTTGCCTTCGATCTTGGTCTGGATGCGCTCCATC 1814
Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634
|||||||||||||| |||||| |||| ||| |||||| ||
Sbjct 1813 TTGTAGCGGTAGAAGACGTCCGTGACATCACGGCGAACGTTGAC 1770
>seq233
Length=18884
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | |||||||| || || ||| | || |||| |
Sbjct 2259 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACCCTGGAGGTGGAGTCGTCG 2200
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||||| ||||| || ||| | || ||| ||
Sbjct 2199 GACACGATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCGCCGGACCAG 2140
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | |||||| || ||||||||||||| | | || || || ||||||
Sbjct 2139 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGATGGCCGCACGCTGAGCGACTACAAC 2080
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || ||| ||||| ||||| | | ||||| || ||
Sbjct 2079 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGCGG 2033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412837051517672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |