Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq233 154 1e-32 seq204 154 1e-32 seq23 111 1e-19 >seq233 Length=18884 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||| || || ||| |||||||| | |||||||||||||| ||||| |||||||| Sbjct 1349 CCACCCCGCAGCCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 1408 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | ||| | || ||||| ||||| || || |||||||| || |||||||| |||| Sbjct 1409 AGCGTCCGCCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGCCGCTGCTGGTCCGGCGGG 1468 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||||||| | || || |||||| | |||| || || ||| || Sbjct 1469 ATCCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCGCTGCTCTCCACC 1528 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || || ||||| ||||| |||||||| || |||||||||||| Sbjct 1529 TCGAGCGTAATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 1576 Score = 150 bits (166), Expect = 1e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||||||||||||||||||| ||||| || || | ||| |||| Sbjct 1592 AGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGCGTCCGCCCATCC 1651 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || ||||| ||||| || |||||||| |||| | ||||||||||| Sbjct 1652 TCCAGCTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 1711 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || || ||| || || | || || ||| Sbjct 1712 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGCTGCTCTCCACCTCGAGCGTAATCGTC 1771 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| |||||||| ||||||||||||||| Sbjct 1772 TTGCCCGTCAGGGTCTTGACAAAGATCTGCATG 1804 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || ||||||||| ||||| ||||| || |||| |||| Sbjct 2048 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCC 2107 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || |||||||| || |||||||| |||| | ||||||||||| Sbjct 2108 TCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 2167 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | ||| || || | ||| || ||| Sbjct 2168 TGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACCTCCAGGGTGATCGTC 2227 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || || ||||| ||||| || ||||| |||||||| Sbjct 2228 TTGCCGGTGAGCGTCTTGACGAAGATTTGCATGAT 2262 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || ||||||||||||||| ||||| ||| |||| | || Sbjct 1820 AGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGACCGTCC 1879 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||| || || |||||||| |||| | |||||||| || Sbjct 1880 TCCAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCC 1939 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | ||| || || | ||| || ||| Sbjct 1940 TGAATCTTCGACTTGACGTTGTCGATCGTGTCCGACGACTCCACCTCCAGGGTGATCGTC 1999 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||| ||||| Sbjct 2000 TTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 2031 >seq204 Length=21219 Score = 154 bits (170), Expect = 1e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||||||||||||| ||||| ||||| || ||| |||| | || Sbjct 5897 CAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 5838 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| || |||||||| |||| | ||||||||||| Sbjct 5837 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 5778 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | |||| || | ||| || |||| ||| ||||| Sbjct 5777 CTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGCTCTCCACCTCAAGGGTGATGGT 5718 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| |||||||||||||| || ||||||||||| Sbjct 5717 CTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 5685 >seq23 Length=165582 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| || ||| | || | || Sbjct 62207 CAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTC 62148 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || || |||||||| || |||||||| |||| | ||||||||||| Sbjct 62147 CTCCAGCTGCTTGCCTGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 62088 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | |||| || || |||||| || | || ||||| Sbjct 62087 CTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAAGTGATGGT 62028 Query 34945 CTTTCCCGTGAGGGTCTTTACAAA 34968 ||| ||||| |||||||| || || Sbjct 62027 CTTGCCCGTCAGGGTCTTCACGAA 62004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689211679576