Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq226 111 2e-19 >seq226 Length=19278 Score = 111 bits (122), Expect = 2e-19 Identities = 150/208 (72%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 146882 TGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGT 146941 |||| ||||| ||||| | | |||||| | ||||| || ||||||| | || Sbjct 16522 TGGGAAAGGGGCGGGGCGCGCGCGTCAGCTGGACGCGCAGGGCGTCGACGTGGTCGGCGT 16581 Query 146942 AGACGTGCGCGTCCCCCAGGGTGTG---CACAAAGTCCCCCGGCTTAAGGCCGGTCACGT 146998 ||||||| ||||| || ||| ||| || || || || |||||| ||| Sbjct 16582 AGACGTGGGCGTCGCCGAGGACGTGGGTCAGCGAG---CCGGGGACGAGGCCGCAGACGC 16638 Query 146999 GGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCA 147058 |||| | ||||| ||||||||| | ||||||||| ||||||||||| || || ||||||| Sbjct 16639 GGGCGAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCCA 16698 Query 147059 TGTCCCCCGACCTCTGGTACAGCTGGCA 147086 |||| | || | |||||| |||||||| Sbjct 16699 TGTCGCAGGAGCGCTGGTAGAGCTGGCA 16726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481406585600