Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06- 27] 904 sequences; 21,299,258 total letters Query= NC_028742.1 Length=70270 Score E Sequences producing significant alignments: (Bits) Value seq589 98.7 4e-16 >seq589 Length=84341 Score = 98.7 bits (108), Expect = 4e-16 Identities = 98/122 (80%), Gaps = 4/122 (3%) Strand=Plus/Plus Query 48080 CTTGCCGGGGTACAGGCGGAGCGCGCGACCGACCATCTGCGAATA-CAGGTTGCGCGAGC 48138 |||||||| || |||||| || |||| |||| |||||| || | |||||||||||||| Sbjct 66120 CTTGCCGGCGTGCAGGCGCAGGCCGCGGCCGATCATCTG-GACGAGCAGGTTGCGCGAGC 66178 Query 48139 GGGTCGGGCGGGCGAGCACCACGGTGTCGCACATCGGG-AAGTCAGCGCCCTCGGTCAAC 48197 |||| |||||||||||||| ||| |||| || |||| | ||| | ||||||||| || Sbjct 66179 GGGTGGGGCGGGCGAGCACGACGCAGTCG-ACGGCGGGCAGGTCGGTGCCCTCGGTGAAG 66237 Query 48198 AC 48199 || Sbjct 66238 AC 66239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224736723935864