Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq204 84.2 2e-11
>seq204
Length=21219
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/234 (68%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||| || || || || || || || || || || || |||| || || |||
Sbjct 5682 AAGATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGAGC 5741
Query 27847 ACCGAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| ||| ||||| ||||| || || ||||| || || | ||| |
Sbjct 5742 TCGGACACGATCGACAAT--GTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCG 5799
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| ||||| || | || || ||||| || || | || |||| |||| | | ||||| |
Sbjct 5800 ACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACT 5859
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCG 28018
|||||||||| || |||||||| |||| |||| |||| ||||||||||||
Sbjct 5860 ACAACATCCAGAAGGAGAGCACGCTGCACCTGGTGCTGCGCCTGCGTGGCGGCG 5913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355858479286008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |