Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystiopsis_20minuta_20[genbank_20GCA_5F001676865.1_202016-06-
27] 904 sequences; 21,299,258 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq226 116 3e-21
seq34 87.8 1e-12
>seq226
Length=19278
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 29606 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCA 29665
|| ||||||||||| | |||| | | | ||||| | | ||| | || ||||||||
Sbjct 16518 AGGGTGGGAAAGGGGCGGGGCGCGCGCGTCAGCTGGACGCGCAGGGCGTCGACGTGGTCG 16577
Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725
||||||||| || || || ||| |||| | | || || | || ||| ||||
Sbjct 16578 GCGTAGACGTGGGCGTCGCCGAGGACGTGGGTCAGCGAGCCGGGGACGAGGCCGCAGACG 16637
Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785
| || | ||||| ||||| || | ||||||||| ||||| |||||||| ||||| |||
Sbjct 16638 CGGGCGAGCATGTGGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACGCCGAGGCCC 16697
Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814
||||| | || | |||||||||||||||
Sbjct 16698 ATGTCGCAGGAGCGCTGGTAGAGCTGGCA 16726
>seq34
Length=160120
Score = 87.8 bits (96), Expect = 1e-12
Identities = 183/273 (67%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 49872 CTCGAGCACGAGCTGGGCTATCCTGTCGCCCCTCTCGACCCGAAAGGCATCACACCCAAA 49931
|||||||||||||||||| || | |||||| | |||| |||| | | ||
Sbjct 15480 CTCGAGCACGAGCTGGGCGATGCGGTCGCCGGGCGCGACGGCAAAGTCGGCGTCGCCGTG 15539
Query 49932 GTTAAACAGTATGACGCCGAGGTTGCCCCTGTAGTCGGGGTCCACCACCCCGGCACCGAC 49991
||| ||||| | ||||| || || ||| | |||||||| ||| | || ||||| |||
Sbjct 15540 GTTGAACAGCAGGACGCGGACGTGGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCCGGT 15599
Query 49992 GTCTATAAACTTTTTCAGGGCCAGGCCGGACCTGGGAGCCACCCTGCCGTAGAGGCCCGG 50051
|| || | || | ||| |||||||| | || || || | |||||| ||| |
Sbjct 15600 GTTGATGGCGTGCTTGACGGCGAGGCCGGAGCGCGGCGCGACGCGGCCGTACGTGCCGGC 15659
Query 50052 GGGCATCTTCACGGCAAGGTCCGTCTTTACCAGGGCCCTGCCGAAGGAGGGGACCACGAC 50111
||||| || ||| ||||| || | || ||||| | |||| | ||||| | |
Sbjct 15660 GGGCACGGCCATGGCCAGGTCGGTGTCGACGAGGGCGCGGCCGCGCGCGGGGATCGTGGT 15719
Query 50112 GGGGTGAGCGGCCGCCAGGTCGTAACCGGCGGC 50144
| | | ||||| ||||||||| ||||| ||
Sbjct 15720 CGCGCGCGCGGCGTACAGGTCGTAGCCGGCCGC 15752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406158725096944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |